| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223319
Identifier: 212223319
GI number: 212223319
Start: 151305
End: 151754
Strand: Reverse
Name: 212223319
Synonym: TON_0173
Alternate gene names: NA
Gene position: 151754-151305 (Counterclockwise)
Preceding gene: 212223320
Following gene: 212223318
Centisome position: 8.21
GC content: 43.78
Gene sequence:
>450_bases TTGAGGAAGTCTTTTATTTTTTTGACTTTCCTGCTATCTTTAATTCTACTCTCCTATCCCCTGAAGGTTTTCATGATAAG CGATGGAGTCTCAAAGAGCGTCTTCCTTTTGGGGGATGTTAACGTAACCATAAAATACGTCCACAGTGTCCAAAGAAGTG AAGTCATCGAAGTCCTGAAAGTGAATAGGAGTGGCATCTACGCGGAGGAAATGCGATGGAGGGATTTCGGTGCGGGTCTC CCGGAAGATATTCAATCCACAGAAAACGGTTACTACGTCAAGAAAATCAACATTCCCCTTGGGGAGAGCTTGGACTTCTG GTTCATCCCCTTGAATAGCGCTGAAATCTGGGTAAATGGGAAGTTAGTTTTTTCACCCAGACGAGAAACCCTTGTTGAAT TTGAGGTTAAGGAATGCAGTCTGTTCGAGATAGCGATTGGGAGGTGTTAA
Upstream 100 bases:
>100_bases ATGGCATGAGCATCCCGCTCCATCCTGGAGCCGCTAAATACTACGAAGAGAATGGCATGACTATCCCGTCAGAGCTCAAA CCTTGAATGGGTGAGCATCC
Downstream 100 bases:
>100_bases AATGGCCGTGGAGGATAAAAAGCCTAAAAAGAAAGCGGAAGAAGTCGAGGGGGTTGTGCTCGAAAAGATCCGGGTACTGC CTCCTTCGCTCGAACGCCTC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRKSFIFLTFLLSLILLSYPLKVFMISDGVSKSVFLLGDVNVTIKYVHSVQRSEVIEVLKVNRSGIYAEEMRWRDFGAGL PEDIQSTENGYYVKKINIPLGESLDFWFIPLNSAEIWVNGKLVFSPRRETLVEFEVKECSLFEIAIGRC
Sequences:
>Translated_149_residues MRKSFIFLTFLLSLILLSYPLKVFMISDGVSKSVFLLGDVNVTIKYVHSVQRSEVIEVLKVNRSGIYAEEMRWRDFGAGL PEDIQSTENGYYVKKINIPLGESLDFWFIPLNSAEIWVNGKLVFSPRRETLVEFEVKECSLFEIAIGRC >Mature_149_residues MRKSFIFLTFLLSLILLSYPLKVFMISDGVSKSVFLLGDVNVTIKYVHSVQRSEVIEVLKVNRSGIYAEEMRWRDFGAGL PEDIQSTENGYYVKKINIPLGESLDFWFIPLNSAEIWVNGKLVFSPRRETLVEFEVKECSLFEIAIGRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17135; Mature: 17135
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSFIFLTFLLSLILLSYPLKVFMISDGVSKSVFLLGDVNVTIKYVHSVQRSEVIEVLK CCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHC VNRSGIYAEEMRWRDFGAGLPEDIQSTENGYYVKKINIPLGESLDFWFIPLNSAEIWVNG CCCCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECC KLVFSPRRETLVEFEVKECSLFEIAIGRC EEEECCCCCEEEEEEECCCEEEEEEECCC >Mature Secondary Structure MRKSFIFLTFLLSLILLSYPLKVFMISDGVSKSVFLLGDVNVTIKYVHSVQRSEVIEVLK CCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHC VNRSGIYAEEMRWRDFGAGLPEDIQSTENGYYVKKINIPLGESLDFWFIPLNSAEIWVNG CCCCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECC KLVFSPRRETLVEFEVKECSLFEIAIGRC EEEECCCCCEEEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA