Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223315

Identifier: 212223315

GI number: 212223315

Start: 146837

End: 147436

Strand: Reverse

Name: 212223315

Synonym: TON_0169

Alternate gene names: NA

Gene position: 147436-146837 (Counterclockwise)

Preceding gene: 212223318

Following gene: 212223309

Centisome position: 7.98

GC content: 50.0

Gene sequence:

>600_bases
ATGAGGTTCGTGCTCGATACGAGCATCTTTGTCAATCCAGAAATAAGGCGAAAGTTTGGGGACAACCCGACCGAGGCTAT
GAGAACATTTCTTGGATATGCTGAGATGCTCTTCGGTAGGGTGGAGTTCTACATGCCCCCCGGTATCTACCGCGAGGTTA
TGCATTTCGTCGATGAAGACGAACTCCTGCCTGAAATCGAGCTCTACATCATAAAGAAGCCCCCCAACGTCCACGACATT
AAGATTCCCGCCTTTGTAGTCTACGAACTGATTGACGACATAAGGAGGCGCATAGACAAGGGCCTCCGCGTCGCTGAGAA
AGCCGTCCGCGAGAGTGTAATCGAAACTGACAACGTCGATAGAATAATCCAGAAGCTGAGGCGGAACTACCGCAAAGCCC
TCCGTGAGGGCATCGTTGATAGCAAGGAAGATTTTGAGCTTATCTTACTAGCAAAAGAGCTCGATGCGACGATAGTTTCT
GCTGATGTCGGGATACTCACCTGGGCTCAGAAGATGGGCATCAAGTGGATCGACGCGGCCAACTTTCGTGAGGTTCTTGA
GGGCCTCGTGGCAAAAATGGGCGAAGGGAAAAATTTATAA

Upstream 100 bases:

>100_bases
TTTGGACTTGCCAGCTCGCTTACTCCAAAAACGACTCCGACTCTCATACTTTCCACCTAACTGTTTTAAACTTCCCCGCT
TAAATAAGCTTGTGGTGGTC

Downstream 100 bases:

>100_bases
ATGCTCACCTGCATGGTATCATCGACGCCCCGGTGGCTCAGCCTGGTGGAGCGGCCGCTTGGTAAGCGGCAGGTCGCGGG
TTCAAACCCCGCCCGGGGCT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDEDELLPEIELYIIKKPPNVHDI
KIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVDRIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVS
ADVGILTWAQKMGIKWIDAANFREVLEGLVAKMGEGKNL

Sequences:

>Translated_199_residues
MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDEDELLPEIELYIIKKPPNVHDI
KIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVDRIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVS
ADVGILTWAQKMGIKWIDAANFREVLEGLVAKMGEGKNL
>Mature_199_residues
MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDEDELLPEIELYIIKKPPNVHDI
KIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVDRIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVS
ADVGILTWAQKMGIKWIDAANFREVLEGLVAKMGEGKNL

Specific function: Unknown

COG id: COG1458

COG function: function code R; Predicted DNA-binding protein containing PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0278 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y169_THEON (B6YSW7)

Other databases:

- EMBL:   CP000855
- RefSeq:   YP_002306551.1
- GeneID:   7017825
- GenomeReviews:   CP000855_GR
- KEGG:   ton:TON_0169
- HOGENOM:   HBG507856
- OMA:   KTPNRYE
- ProtClustDB:   PRK04358
- HAMAP:   MF_01078
- InterPro:   IPR014856
- InterPro:   IPR022785
- TIGRFAMs:   TIGR03875

Pfam domain/function: PF08745 UPF0278

EC number: NA

Molecular weight: Translated: 23116; Mature: 23116

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDED
CCEEEECCEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHH
ELLPEIELYIIKKPPNVHDIKIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVD
HCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVSADVGILTWAQKMGIKWIDAA
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
NFREVLEGLVAKMGEGKNL
CHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRFVLDTSIFVNPEIRRKFGDNPTEAMRTFLGYAEMLFGRVEFYMPPGIYREVMHFVDED
CCEEEECCEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHH
ELLPEIELYIIKKPPNVHDIKIPAFVVYELIDDIRRRIDKGLRVAEKAVRESVIETDNVD
HCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RIIQKLRRNYRKALREGIVDSKEDFELILLAKELDATIVSADVGILTWAQKMGIKWIDAA
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
NFREVLEGLVAKMGEGKNL
CHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA