| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223155
Identifier: 212223155
GI number: 212223155
Start: 13936
End: 14226
Strand: Reverse
Name: 212223155
Synonym: TON_0011
Alternate gene names: NA
Gene position: 14226-13936 (Counterclockwise)
Preceding gene: 212223156
Following gene: 212223154
Centisome position: 0.77
GC content: 54.64
Gene sequence:
>291_bases ATGAAATACCGCGACTTCTTGACTCTACACGTTCTCCACCACGCAGAAAGGGAGCCAATAACCGGTTCTTTCATGATGGA AGAGCTCAAAAGACATGGCTATCACATCAGCCCGGGCACGATATACCCCCTTCTGCACGGCATGGAGGAAAGCGGGCTCC TAAAGAGCCACTGGGAAGTGCGGGACGGAAGGCGCGTCAGGGTCTACGAGATAACTCCGAAGGGAAAGAAAGCCCTCGAA GAGGGCAGGGAACGAGTTAGGGAGCTGTGCAGAGAACTCCTGGAGGAGTGA
Upstream 100 bases:
>100_bases CTTTGAGGGAACCTTCCACTGCTACGTCCTTGAGAAGCACGTCCTCGAGTGACAAAAATTTTTTAAATCTCAATATCGGA TTTCGATATCGGTGTTCGAT
Downstream 100 bases:
>100_bases AATATGGGGGAGAAGGAAAAGAAAATCTTCGGCGTTAGCCGGAACGTCTTCCTGCTCGGGATCGTCAGCTTCCTCAACGA CATGAGCAGTGAGATGATAG
Product: protein
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR Family; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator PadR-Type; ParR Family Transcriptional Regulator; Transcriptional Regulator Padr Family; Transcription Regulator PadR-Like Family
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEVRDGRRVRVYEITPKGKKALE EGRERVRELCRELLEE
Sequences:
>Translated_96_residues MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEVRDGRRVRVYEITPKGKKALE EGRERVRELCRELLEE >Mature_96_residues MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEVRDGRRVRVYEITPKGKKALE EGRERVRELCRELLEE
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11439; Mature: 11439
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEV CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHCCCCC RDGRRVRVYEITPKGKKALEEGRERVRELCRELLEE CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYRDFLTLHVLHHAEREPITGSFMMEELKRHGYHISPGTIYPLLHGMEESGLLKSHWEV CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHCCCCC RDGRRVRVYEITPKGKKALEEGRERVRELCRELLEE CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA