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The map label for this gene is hslR [H]

Identifier: 209696324

GI number: 209696324

Start: 3169675

End: 3170076

Strand: Direct

Name: hslR [H]

Synonym: VSAL_I2926

Alternate gene names: 209696324

Gene position: 3169675-3170076 (Clockwise)

Preceding gene: 209696308

Following gene: 209696325

Centisome position: 95.32

GC content: 42.54

Gene sequence:

>402_bases
ATGAGTTCAAAATCCAACACTATTGAAGGTGTAAGACTTGATAAATGGCTCTGGGCAGCTCGTTTTTACAAAACACGCTC
AGTGGCACGCAATATGGTTGATGGCGGTAAAGTTCATTATAATGGCCAGCGTGCAAAACCAAGTAAAATTATCGATCTTG
GTGCGGAAGTAAAGCTTCGCCAAGGGAATAATGAAGAGATCACCGTGATCGTCGAGATCATCTCCGATCAACGCCGTGGT
GCTCCCGTTGCACAAACTCTTTACAAAGAAACACAAAGCAGTATTGAGCGTCGTGAAGAAAATGCGAAATTACGCAAATT
AAACTCCCTTGGGAGCCCGCATCCTGATAAACGTCCAGATAAAAAACAACGACGTGATATCATGAAGTTTAAGCAACAAT
AA

Upstream 100 bases:

>100_bases
CTCTAATTGGTTATGAATTTTGATTAATTCGTGCCAAAAGATTGAAAAATAATTTACAGCCACCATCTTAGTTAGCTGAG
ATAAGACATAGGTATCCATC

Downstream 100 bases:

>100_bases
CTGACTTTCTTCTTTATTTACCTTTTCTCAAGGTTATAGCGGCTATAATAGCGATAACTGTAACCTCTAATACAATTGCT
GGAGTATTTCATGGCAAATA

Product: heat shock protein 15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSSKSNTIEGVRLDKWLWAARFYKTRSVARNMVDGGKVHYNGQRAKPSKIIDLGAEVKLRQGNNEEITVIVEIISDQRRG
APVAQTLYKETQSSIERREENAKLRKLNSLGSPHPDKRPDKKQRRDIMKFKQQ

Sequences:

>Translated_133_residues
MSSKSNTIEGVRLDKWLWAARFYKTRSVARNMVDGGKVHYNGQRAKPSKIIDLGAEVKLRQGNNEEITVIVEIISDQRRG
APVAQTLYKETQSSIERREENAKLRKLNSLGSPHPDKRPDKKQRRDIMKFKQQ
>Mature_132_residues
SSKSNTIEGVRLDKWLWAARFYKTRSVARNMVDGGKVHYNGQRAKPSKIIDLGAEVKLRQGNNEEITVIVEIISDQRRGA
PVAQTLYKETQSSIERREENAKLRKLNSLGSPHPDKRPDKKQRRDIMKFKQQ

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=122, Percent_Identity=65.5737704918033, Blast_Score=173, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15347; Mature: 15216

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKSNTIEGVRLDKWLWAARFYKTRSVARNMVDGGKVHYNGQRAKPSKIIDLGAEVKLR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEECCCCEEEE
QGNNEEITVIVEIISDQRRGAPVAQTLYKETQSSIERREENAKLRKLNSLGSPHPDKRPD
CCCCCEEEEEHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KKQRRDIMKFKQQ
HHHHHHHHHHHCC
>Mature Secondary Structure 
SSKSNTIEGVRLDKWLWAARFYKTRSVARNMVDGGKVHYNGQRAKPSKIIDLGAEVKLR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHEECCCCEEEE
QGNNEEITVIVEIISDQRRGAPVAQTLYKETQSSIERREENAKLRKLNSLGSPHPDKRPD
CCCCCEEEEEHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KKQRRDIMKFKQQ
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]