| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is epsG [H]
Identifier: 209696319
GI number: 209696319
Start: 3163185
End: 3163634
Strand: Reverse
Name: epsG [H]
Synonym: VSAL_I2921
Alternate gene names: 209696319
Gene position: 3163634-3163185 (Counterclockwise)
Preceding gene: 209696320
Following gene: 209696318
Centisome position: 95.14
GC content: 40.89
Gene sequence:
>450_bases ATGCAAGTCAATTCCGCTCAACGTAAACAAGGTGGCTTTACACTTTTAGAAGTGATGGTCGTTATCGTTATTCTTGGTGT GCTAGCTAGCTTAGTTGTCCCTAATTTATTGGGTAACAAAGAAAAAGCCGATCAACAAAAAGCGATCACAGATATCGTAG CGCTAGAAAACTCATTGGATATGTATAAGTTAGATAACAGTGTATACCCAACGACAGATCAAGGCTTAGAAGCATTGGTA TCGAAACCATCAGCAAGTCCAGAGCCTCGTAATTATCGTGCTGACGGTTATATTCGTCGTTTGCCAAATGACCCATGGGG TTATGAATACCAATACCTAAGTCCTGGTGATAATGGCACGATTGATATCTTCTCTTTAGGTGCTGATGGTCAAGAAGGCG GTGAAGGAGCTAATGCAGATATTGGTAACTGGAACATGCAAGACTTTTAA
Upstream 100 bases:
>100_bases TATGCCAATAATCGAATTAAACAATTTAGTTGGATAGTGAATAGACACTATCCTTTTCTTTTTTATTACTATGTTGAATT TTTAACGTCAGGAGTCATTC
Downstream 100 bases:
>100_bases TAAGTCATAAGCTTATCGTTAAATAAGAGCGATGAAGATAAAACGTGAGGTTGGGTTTACCCTAATCGAAATAATGTTGG TATTGGTGCTGCTGTCGGTA
Product: general secretion pathway protein G
Products: NA
Alternate protein names: Cholera toxin secretion protein epsG [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MQVNSAQRKQGGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAITDIVALENSLDMYKLDNSVYPTTDQGLEALV SKPSASPEPRNYRADGYIRRLPNDPWGYEYQYLSPGDNGTIDIFSLGADGQEGGEGANADIGNWNMQDF
Sequences:
>Translated_149_residues MQVNSAQRKQGGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAITDIVALENSLDMYKLDNSVYPTTDQGLEALV SKPSASPEPRNYRADGYIRRLPNDPWGYEYQYLSPGDNGTIDIFSLGADGQEGGEGANADIGNWNMQDF >Mature_149_residues MQVNSAQRKQGGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAITDIVALENSLDMYKLDNSVYPTTDQGLEALV SKPSASPEPRNYRADGYIRRLPNDPWGYEYQYLSPGDNGTIDIFSLGADGQEGGEGANADIGNWNMQDF
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for secretion of cholera toxin through the outer membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=141, Percent_Identity=63.8297872340426, Blast_Score=163, Evalue=5e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 16268; Mature: 16268
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS00409 PROKAR_NTER_METHYL ; PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVNSAQRKQGGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAITDIVALENSLD CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC MYKLDNSVYPTTDQGLEALVSKPSASPEPRNYRADGYIRRLPNDPWGYEYQYLSPGDNGT EEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCC IDIFSLGADGQEGGEGANADIGNWNMQDF EEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQVNSAQRKQGGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAITDIVALENSLD CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC MYKLDNSVYPTTDQGLEALVSKPSASPEPRNYRADGYIRRLPNDPWGYEYQYLSPGDNGT EEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCC IDIFSLGADGQEGGEGANADIGNWNMQDF EEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]