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The map label for this gene is epsH [H]

Identifier: 209696318

GI number: 209696318

Start: 3162557

End: 3163153

Strand: Reverse

Name: epsH [H]

Synonym: VSAL_I2920

Alternate gene names: 209696318

Gene position: 3163153-3162557 (Counterclockwise)

Preceding gene: 209696319

Following gene: 209696317

Centisome position: 95.13

GC content: 42.55

Gene sequence:

>597_bases
ATGAAGATAAAACGTGAGGTTGGGTTTACCCTAATCGAAATAATGTTGGTATTGGTGCTGCTGTCGGTAAGTTCGATGGC
GGTCATCATGAGCTTACCTGAAAGTCGAGATGATCATCTTGAAGAGCAGGCCTCACGTTTTTATCAGTTAGTTCAGCTTC
TCAATGAAGATGCTTTACTCAACGGGATGGATTACGGCATCTATTTCAATCAAGAGCGACAAGAATATCGCTTTATGACA
TTGACATCAGATGGCTGGCAGCCTCTTGAGAAAAGTCGCTTTTTTACTGAAGTGAAAATAGAAAAAGACATCGAATTTGA
GATGGAGTTAGGCGGTTCCGCATGGGCTGACGACGATCGCTTATTTGAACCGGGTTCTTTGTTTGATGAAGACATGTTCG
CGGATGTCGAGAAAGATAAAAAACCGAAACCGCCGCAAGTAATGGTGTTATCAAGTGGTGAAGTGACCCCATTTTTATTT
CGCCTTTTTCCTGCGAAGGTAAGTGGAAACCTTGATAATCAAACGTGGTTAATTAAAGCGGATGAATCTGGTGTGATCAC
GTTGGATAAGCCAGGGGAAGAAGACGATGAAAAGTAG

Upstream 100 bases:

>100_bases
GCTGATGGTCAAGAAGGCGGTGAAGGAGCTAATGCAGATATTGGTAACTGGAACATGCAAGACTTTTAATAAGTCATAAG
CTTATCGTTAAATAAGAGCG

Downstream 100 bases:

>100_bases
TCATTATGTGCACTCTCGGCACAAAGGCATGACGTTACTTGAAGTCTTAGTTGCCCTTGCTATTTTTGCTACCGCCGCAT
TAAGTGTATTGAGATCCGTT

Product: general secretion pathway protein H precursor

Products: NA

Alternate protein names: Cholera toxin secretion protein epsH [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKIKREVGFTLIEIMLVLVLLSVSSMAVIMSLPESRDDHLEEQASRFYQLVQLLNEDALLNGMDYGIYFNQERQEYRFMT
LTSDGWQPLEKSRFFTEVKIEKDIEFEMELGGSAWADDDRLFEPGSLFDEDMFADVEKDKKPKPPQVMVLSSGEVTPFLF
RLFPAKVSGNLDNQTWLIKADESGVITLDKPGEEDDEK

Sequences:

>Translated_198_residues
MKIKREVGFTLIEIMLVLVLLSVSSMAVIMSLPESRDDHLEEQASRFYQLVQLLNEDALLNGMDYGIYFNQERQEYRFMT
LTSDGWQPLEKSRFFTEVKIEKDIEFEMELGGSAWADDDRLFEPGSLFDEDMFADVEKDKKPKPPQVMVLSSGEVTPFLF
RLFPAKVSGNLDNQTWLIKADESGVITLDKPGEEDDEK
>Mature_198_residues
MKIKREVGFTLIEIMLVLVLLSVSSMAVIMSLPESRDDHLEEQASRFYQLVQLLNEDALLNGMDYGIYFNQERQEYRFMT
LTSDGWQPLEKSRFFTEVKIEKDIEFEMELGGSAWADDDRLFEPGSLFDEDMFADVEKDKKPKPPQVMVLSSGEVTPFLF
RLFPAKVSGNLDNQTWLIKADESGVITLDKPGEEDDEK

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP H family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR022346 [H]

Pfam domain/function: PF12019 GspH [H]

EC number: NA

Molecular weight: Translated: 22791; Mature: 22791

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKREVGFTLIEIMLVLVLLSVSSMAVIMSLPESRDDHLEEQASRFYQLVQLLNEDALL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHC
NGMDYGIYFNQERQEYRFMTLTSDGWQPLEKSRFFTEVKIEKDIEFEMELGGSAWADDDR
CCCCCCEEECCCCCCEEEEEEECCCCCCHHHCCCEEEEEECCCCEEEEEECCCCCCCCCC
LFEPGSLFDEDMFADVEKDKKPKPPQVMVLSSGEVTPFLFRLFPAKVSGNLDNQTWLIKA
CCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
DESGVITLDKPGEEDDEK
CCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKIKREVGFTLIEIMLVLVLLSVSSMAVIMSLPESRDDHLEEQASRFYQLVQLLNEDALL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHC
NGMDYGIYFNQERQEYRFMTLTSDGWQPLEKSRFFTEVKIEKDIEFEMELGGSAWADDDR
CCCCCCEEECCCCCCEEEEEEECCCCCCHHHCCCEEEEEECCCCEEEEEECCCCCCCCCC
LFEPGSLFDEDMFADVEKDKKPKPPQVMVLSSGEVTPFLFRLFPAKVSGNLDNQTWLIKA
CCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
DESGVITLDKPGEEDDEK
CCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]