Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yecH [H]

Identifier: 209696305

GI number: 209696305

Start: 3151679

End: 3151921

Strand: Reverse

Name: yecH [H]

Synonym: VSAL_I2907

Alternate gene names: 209696305

Gene position: 3151921-3151679 (Counterclockwise)

Preceding gene: 209696306

Following gene: 209696302

Centisome position: 94.79

GC content: 36.21

Gene sequence:

>243_bases
ATGAAGCAAGATATCCATGGACACAGTGTATTAAACATTCTACTGAACTCTGAGGTTCCTTTACCTCGTGCTGAGTTAGA
ATTGATGGTTATTACTGAGTTCGGTTCTGACGTTTGTTTTCATACATGCAGTCAGCAAGAGTTGACGTTAAATGAATTAC
TGAATTTTTTATTATCTAAGAAGAAAGTGATAGAAACCAATGATGGCTTAATCGCAGACCCTGATCGCATGTGTAATCAT
TAA

Upstream 100 bases:

>100_bases
GATAGAGATTAAAAACGGTAAGTTTAGATCTACAACAAAAGTATAGACGATGATCTTTGTTATGCTGACGATAAGACCTT
ATATTTTATTAGGAAGCACA

Downstream 100 bases:

>100_bases
ATACAAAAAAAGATCGCTAGTAAGCGACCTTTTTTATAATTGCACAAAACTACATGCCGATGGTTGTTGTTGCATATTTA
AAGTAACTCATGATGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSKKKVIETNDGLIADPDRMCNH

Sequences:

>Translated_80_residues
MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSKKKVIETNDGLIADPDRMCNH
>Mature_80_residues
MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSKKKVIETNDGLIADPDRMCNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788217, Length=77, Percent_Identity=40.2597402597403, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019620 [H]

Pfam domain/function: PF10678 DUF2492 [H]

EC number: NA

Molecular weight: Translated: 9062; Mature: 9062

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSK
CCCCCCCHHHHHHEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHCC
KKVIETNDGLIADPDRMCNH
CCEEECCCCEEECHHHHCCC
>Mature Secondary Structure
MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSK
CCCCCCCHHHHHHEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHCC
KKVIETNDGLIADPDRMCNH
CCEEECCCCEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]