| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yecH [H]
Identifier: 209696305
GI number: 209696305
Start: 3151679
End: 3151921
Strand: Reverse
Name: yecH [H]
Synonym: VSAL_I2907
Alternate gene names: 209696305
Gene position: 3151921-3151679 (Counterclockwise)
Preceding gene: 209696306
Following gene: 209696302
Centisome position: 94.79
GC content: 36.21
Gene sequence:
>243_bases ATGAAGCAAGATATCCATGGACACAGTGTATTAAACATTCTACTGAACTCTGAGGTTCCTTTACCTCGTGCTGAGTTAGA ATTGATGGTTATTACTGAGTTCGGTTCTGACGTTTGTTTTCATACATGCAGTCAGCAAGAGTTGACGTTAAATGAATTAC TGAATTTTTTATTATCTAAGAAGAAAGTGATAGAAACCAATGATGGCTTAATCGCAGACCCTGATCGCATGTGTAATCAT TAA
Upstream 100 bases:
>100_bases GATAGAGATTAAAAACGGTAAGTTTAGATCTACAACAAAAGTATAGACGATGATCTTTGTTATGCTGACGATAAGACCTT ATATTTTATTAGGAAGCACA
Downstream 100 bases:
>100_bases ATACAAAAAAAGATCGCTAGTAAGCGACCTTTTTTATAATTGCACAAAACTACATGCCGATGGTTGTTGTTGCATATTTA AAGTAACTCATGATGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSKKKVIETNDGLIADPDRMCNH
Sequences:
>Translated_80_residues MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSKKKVIETNDGLIADPDRMCNH >Mature_80_residues MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSKKKVIETNDGLIADPDRMCNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788217, Length=77, Percent_Identity=40.2597402597403, Blast_Score=71, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019620 [H]
Pfam domain/function: PF10678 DUF2492 [H]
EC number: NA
Molecular weight: Translated: 9062; Mature: 9062
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSK CCCCCCCHHHHHHEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHCC KKVIETNDGLIADPDRMCNH CCEEECCCCEEECHHHHCCC >Mature Secondary Structure MKQDIHGHSVLNILLNSEVPLPRAELELMVITEFGSDVCFHTCSQQELTLNELLNFLLSK CCCCCCCHHHHHHEECCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHCC KKVIETNDGLIADPDRMCNH CCEEECCCCEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]