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The map label for this gene is ftsY [H]

Identifier: 209696302

GI number: 209696302

Start: 3148694

End: 3149926

Strand: Reverse

Name: ftsY [H]

Synonym: VSAL_I2903

Alternate gene names: 209696302

Gene position: 3149926-3148694 (Counterclockwise)

Preceding gene: 209696305

Following gene: 209696301

Centisome position: 94.73

GC content: 39.98

Gene sequence:

>1233_bases
ATGACAGGCAAAAAGAAACGCGGATTATTGTCTTGGTTAGGTTTTGGTGATGAAGAAAAAGCCGAACAACCAACAGTAGA
GCAACAATCAGTAGAAGAAAGCACTGATGAGAGTGTAATTGAAGATGTTCAAATTGAACAGCTCAAAGAGAATGAAGAGG
TTACGACTTCCATTGAAGTGGATGAACCACAGCAATTGGAGGTAATTGACTCTACACTTGAAGAAAATAAAGAAGAAGAG
CTGGTTGTTGAGGCTGTAGTCGTTGAAGAAATTGCGACGTCTAATATTGAAGAAGTACAAGAAAAGCCAACAGAAAGTTT
TTTTGCTCGATTAAAGCGCAGTTTACAACGCACAAAAGAAAACATTGGTGCGGGATTTTTTGGTTTATTCAGCGGTAAAA
AAATAGATGAAGATCTATTTGAAGAATTAGAAGAGCAATTATTGATTGCTGATGTGGGGATGGATACCACTGTTAAAATT
ATTAATAGCTTAACGGAAAAGGCAAGTAAACGTGATTTGAAAGATGGTGAAGCTTTATATGGCCTGCTAAAAGAAGAAAT
GGCTGAGATTTTAGTTAAAGTGGAGCAACCTTTAGTCATCGATGAAAAAAACAGCCCTCATGTAATCTTAATGGTTGGTG
TTAATGGGGTAGGTAAAACGACGACAATTGGTAAGTTAGCTAAACAATTTCAAAATGATGGTAAGTCCGTCATTTTAGCG
GCGGGCGATACATTCCGTGCAGCGGCGGTTGAACAACTTCAAGTATGGGGTCAACGTAATGATGTCCCTGTTATTGCGCA
GCACACTGGTGCCGACAGCGCCTCGGTTATTTATGATGCTATTGAAGCCGCAAAAGCTCGAAAAGTAGACGTTGTGATTG
CAGATACTGCAGGTCGTCTCCAAAATAAGAGTAACTTGATGGAAGAATTGCGTAAAATTGTACGTGTAATGCAGAAGATA
GATCCATCAGCGCCTCATGAAGTGATGCTAACGCTTGATGCGGGTACTGGTCAAAACGCCATTAGCCAAGCCAAACTATT
TAGCGATGTTGCACCGGTTACGGGAATTACATTAACAAAATTAGATGGTACTGCAAAAGGTGGCGTAATCTTCTCTATTG
CCGATCAATTTCAAATCCCAATCCGTTATATTGGTGTTGGTGAAGGCATTGATGATTTACGTCCGTTTGTGGCGCAAGAT
TTCATTGATGCGCTATTTAGTCGTGAGGAATAA

Upstream 100 bases:

>100_bases
GCGAGATGAATGTTGTTTACGTTTAAGCATAGATTTTTTGACCGCTAAGAAAGTGATAGTATACGAGAAAATGGTACCAA
TTTAATTCTAGGATTTCTCA

Downstream 100 bases:

>100_bases
CATGTGATTCGATTTCAGCAAGTTTCAAAAGCCTATCGAGGTGGTCGCCCAGCATTACAAAAAGTAAATTTTCACCTTAA
TAGAGGCGAAATGGCTTTTT

Product: cell division protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTGKKKRGLLSWLGFGDEEKAEQPTVEQQSVEESTDESVIEDVQIEQLKENEEVTTSIEVDEPQQLEVIDSTLEENKEEE
LVVEAVVVEEIATSNIEEVQEKPTESFFARLKRSLQRTKENIGAGFFGLFSGKKIDEDLFEELEEQLLIADVGMDTTVKI
INSLTEKASKRDLKDGEALYGLLKEEMAEILVKVEQPLVIDEKNSPHVILMVGVNGVGKTTTIGKLAKQFQNDGKSVILA
AGDTFRAAAVEQLQVWGQRNDVPVIAQHTGADSASVIYDAIEAAKARKVDVVIADTAGRLQNKSNLMEELRKIVRVMQKI
DPSAPHEVMLTLDAGTGQNAISQAKLFSDVAPVTGITLTKLDGTAKGGVIFSIADQFQIPIRYIGVGEGIDDLRPFVAQD
FIDALFSREE

Sequences:

>Translated_410_residues
MTGKKKRGLLSWLGFGDEEKAEQPTVEQQSVEESTDESVIEDVQIEQLKENEEVTTSIEVDEPQQLEVIDSTLEENKEEE
LVVEAVVVEEIATSNIEEVQEKPTESFFARLKRSLQRTKENIGAGFFGLFSGKKIDEDLFEELEEQLLIADVGMDTTVKI
INSLTEKASKRDLKDGEALYGLLKEEMAEILVKVEQPLVIDEKNSPHVILMVGVNGVGKTTTIGKLAKQFQNDGKSVILA
AGDTFRAAAVEQLQVWGQRNDVPVIAQHTGADSASVIYDAIEAAKARKVDVVIADTAGRLQNKSNLMEELRKIVRVMQKI
DPSAPHEVMLTLDAGTGQNAISQAKLFSDVAPVTGITLTKLDGTAKGGVIFSIADQFQIPIRYIGVGEGIDDLRPFVAQD
FIDALFSREE
>Mature_409_residues
TGKKKRGLLSWLGFGDEEKAEQPTVEQQSVEESTDESVIEDVQIEQLKENEEVTTSIEVDEPQQLEVIDSTLEENKEEEL
VVEAVVVEEIATSNIEEVQEKPTESFFARLKRSLQRTKENIGAGFFGLFSGKKIDEDLFEELEEQLLIADVGMDTTVKII
NSLTEKASKRDLKDGEALYGLLKEEMAEILVKVEQPLVIDEKNSPHVILMVGVNGVGKTTTIGKLAKQFQNDGKSVILAA
GDTFRAAAVEQLQVWGQRNDVPVIAQHTGADSASVIYDAIEAAKARKVDVVIADTAGRLQNKSNLMEELRKIVRVMQKID
PSAPHEVMLTLDAGTGQNAISQAKLFSDVAPVTGITLTKLDGTAKGGVIFSIADQFQIPIRYIGVGEGIDDLRPFVAQDF
IDALFSREE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=281, Percent_Identity=33.8078291814947, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI226371618, Length=251, Percent_Identity=35.8565737051793, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI23308697, Length=331, Percent_Identity=29.607250755287, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI295424842, Length=331, Percent_Identity=29.607250755287, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI89061728, Length=143, Percent_Identity=34.2657342657343, Blast_Score=90, Evalue=4e-18,
Organism=Escherichia coli, GI1789874, Length=323, Percent_Identity=76.4705882352941, Blast_Score=476, Evalue=1e-135,
Organism=Escherichia coli, GI1788963, Length=295, Percent_Identity=32.8813559322034, Blast_Score=144, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=204, Percent_Identity=32.3529411764706, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=307, Percent_Identity=31.5960912052117, Blast_Score=114, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=212, Percent_Identity=35.8490566037736, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6320498, Length=234, Percent_Identity=29.9145299145299, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647949, Length=281, Percent_Identity=30.6049822064057, Blast_Score=131, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=28.2392026578073, Blast_Score=111, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 45059; Mature: 44928

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKKKRGLLSWLGFGDEEKAEQPTVEQQSVEESTDESVIEDVQIEQLKENEEVTTSIEV
CCCCHHCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
DEPQQLEVIDSTLEENKEEELVVEAVVVEEIATSNIEEVQEKPTESFFARLKRSLQRTKE
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHH
NIGAGFFGLFSGKKIDEDLFEELEEQLLIADVGMDTTVKIINSLTEKASKRDLKDGEALY
HHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
GLLKEEMAEILVKVEQPLVIDEKNSPHVILMVGVNGVGKTTTIGKLAKQFQNDGKSVILA
HHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE
AGDTFRAAAVEQLQVWGQRNDVPVIAQHTGADSASVIYDAIEAAKARKVDVVIADTAGRL
CCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHH
QNKSNLMEELRKIVRVMQKIDPSAPHEVMLTLDAGTGQNAISQAKLFSDVAPVTGITLTK
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE
LDGTAKGGVIFSIADQFQIPIRYIGVGEGIDDLRPFVAQDFIDALFSREE
CCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGKKKRGLLSWLGFGDEEKAEQPTVEQQSVEESTDESVIEDVQIEQLKENEEVTTSIEV
CCCHHCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
DEPQQLEVIDSTLEENKEEELVVEAVVVEEIATSNIEEVQEKPTESFFARLKRSLQRTKE
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHH
NIGAGFFGLFSGKKIDEDLFEELEEQLLIADVGMDTTVKIINSLTEKASKRDLKDGEALY
HHCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
GLLKEEMAEILVKVEQPLVIDEKNSPHVILMVGVNGVGKTTTIGKLAKQFQNDGKSVILA
HHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE
AGDTFRAAAVEQLQVWGQRNDVPVIAQHTGADSASVIYDAIEAAKARKVDVVIADTAGRL
CCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHH
QNKSNLMEELRKIVRVMQKIDPSAPHEVMLTLDAGTGQNAISQAKLFSDVAPVTGITLTK
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE
LDGTAKGGVIFSIADQFQIPIRYIGVGEGIDDLRPFVAQDFIDALFSREE
CCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]