Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yhhL [C]

Identifier: 209696304

GI number: 209696304

Start: 3150606

End: 3150878

Strand: Direct

Name: yhhL [C]

Synonym: VSAL_I2905

Alternate gene names: 209696304

Gene position: 3150606-3150878 (Clockwise)

Preceding gene: 209696303

Following gene: 209696307

Centisome position: 94.75

GC content: 38.1

Gene sequence:

>273_bases
ATGAAAGGACTGATCATTCTTGCCAAAGCAGCCATAGGGTTTGTTTGGCTAATTTTATTATTAAATATTTTTATGCCTTT
CCCAGGAAAAGCAGCCATTGCCCTCTATATCATGACCGCCTTCTTATTCATGATGCATGGCTTACAGATGCTTATCTTTA
TTGGCGCATTCGGCGATAAGATCACCATGAGCCGATGGGAAAAATGGTCCATTCTGATTTTTGGTGTCTTTGCATTACTC
GATATAAGAACAAAACACATGATGGAAAAATAA

Upstream 100 bases:

>100_bases
AAAAGAACTAAGCTCATTGCCAACGCCTGCTCATTGGCGATTGCATAGAGATAAAACCGCAGGACAAGTTACATTTAAAC
TATATGAAAGAGAGGAATAG

Downstream 100 bases:

>100_bases
CCCTCATCAAACGATAGTATTAAGGAGCATTTATTGTTCCTTTTTTTATGCCTATCAGTCATTCGTTCTGCCACTTTTCA
ATTCGCTATGTATGTTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKGLIILAKAAIGFVWLILLLNIFMPFPGKAAIALYIMTAFLFMMHGLQMLIFIGAFGDKITMSRWEKWSILIFGVFALL
DIRTKHMMEK

Sequences:

>Translated_90_residues
MKGLIILAKAAIGFVWLILLLNIFMPFPGKAAIALYIMTAFLFMMHGLQMLIFIGAFGDKITMSRWEKWSILIFGVFALL
DIRTKHMMEK
>Mature_90_residues
MKGLIILAKAAIGFVWLILLLNIFMPFPGKAAIALYIMTAFLFMMHGLQMLIFIGAFGDKITMSRWEKWSILIFGVFALL
DIRTKHMMEK

Specific function: Unknown

COG id: COG3776

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10311; Mature: 10311

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLIILAKAAIGFVWLILLLNIFMPFPGKAAIALYIMTAFLFMMHGLQMLIFIGAFGDK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ITMSRWEKWSILIFGVFALLDIRTKHMMEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGLIILAKAAIGFVWLILLLNIFMPFPGKAAIALYIMTAFLFMMHGLQMLIFIGAFGDK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ITMSRWEKWSILIFGVFALLDIRTKHMMEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA