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The map label for this gene is csgF [H]

Identifier: 209696258

GI number: 209696258

Start: 3094233

End: 3094634

Strand: Reverse

Name: csgF [H]

Synonym: VSAL_I2856

Alternate gene names: 209696258

Gene position: 3094634-3094233 (Counterclockwise)

Preceding gene: 209696259

Following gene: 209696255

Centisome position: 93.07

GC content: 38.06

Gene sequence:

>402_bases
ATGAACATAAGGATCATACTCTTTATTCTGATCAATATGGTAGCAAGCGTAGGTCAAGCAAGTGAGCTTGTTTATATTCC
AGTAAATCCAAATTTTGGGGGAAACCCGCTTAACACAAGCCATTTATTTGCTGGAGCGAATGCCATTAATGATTATAAAG
GGCCGCAAGATGACTCATTATTTGAGCAAGAATCGGCGTTAGATCGCTTAACCTCAAGTTTAGAATCTCGTTTGATTAGC
CAGCTATTGGCGGATGTGGGCAACGGTAATACAGGCCAATTAGTTACTGATGATTTTATACTTAATATTGTTGATGATTC
TGGAGCGTTACTGATTCAAATTGTTGATAAAGAAACAGGTGAAACCTCTGAAATACAAGTCAGTGGTCTTACTCCAGATT
AA

Upstream 100 bases:

>100_bases
AGCAGTAGAAGCGGTTAATCAATATATCGTGAAATGGCAAACAGAAAAATTATTTAAAGATACATATGATCTCGATTTTC
CGGAGATCTAAGGATGTAGC

Downstream 100 bases:

>100_bases
TTTCTAAGCTAAGGAATCAGCAATGAAATATTCAATGTTATTTTTATTACTTTTTATGATATCAGGTTGCTCTAAATCAA
TTGGAGTTCCTGATGCTTCT

Product: assembly/transport component in curli production, CsgF precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNIRIILFILINMVASVGQASELVYIPVNPNFGGNPLNTSHLFAGANAINDYKGPQDDSLFEQESALDRLTSSLESRLIS
QLLADVGNGNTGQLVTDDFILNIVDDSGALLIQIVDKETGETSEIQVSGLTPD

Sequences:

>Translated_133_residues
MNIRIILFILINMVASVGQASELVYIPVNPNFGGNPLNTSHLFAGANAINDYKGPQDDSLFEQESALDRLTSSLESRLIS
QLLADVGNGNTGQLVTDDFILNIVDDSGALLIQIVDKETGETSEIQVSGLTPD
>Mature_133_residues
MNIRIILFILINMVASVGQASELVYIPVNPNFGGNPLNTSHLFAGANAINDYKGPQDDSLFEQESALDRLTSSLESRLIS
QLLADVGNGNTGQLVTDDFILNIVDDSGALLIQIVDKETGETSEIQVSGLTPD

Specific function: May be involved in the biogenesis of curli organelles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787275, Length=93, Percent_Identity=40.8602150537634, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018893 [H]

Pfam domain/function: PF10614 Tafi-CsgF [H]

EC number: NA

Molecular weight: Translated: 14248; Mature: 14248

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRIILFILINMVASVGQASELVYIPVNPNFGGNPLNTSHLFAGANAINDYKGPQDDSL
CCEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHH
FEQESALDRLTSSLESRLISQLLADVGNGNTGQLVTDDFILNIVDDSGALLIQIVDKETG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCEEEEEEECCCCC
ETSEIQVSGLTPD
CCCEEEEECCCCC
>Mature Secondary Structure
MNIRIILFILINMVASVGQASELVYIPVNPNFGGNPLNTSHLFAGANAINDYKGPQDDSL
CCEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHH
FEQESALDRLTSSLESRLISQLLADVGNGNTGQLVTDDFILNIVDDSGALLIQIVDKETG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCEEEEEEECCCCC
ETSEIQVSGLTPD
CCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]