Click here to switch to the map view.

The map label for this gene is yibN [H]

Identifier: 209696209

GI number: 209696209

Start: 3034600

End: 3035037

Strand: Reverse

Name: yibN [H]

Synonym: VSAL_I2803

Alternate gene names: 209696209

Gene position: 3035037-3034600 (Counterclockwise)

Preceding gene: 209696211

Following gene: 209696208

Centisome position: 91.27

GC content: 38.81

Gene sequence:

>438_bases
ATGGAAACGTCAATCATCGATTTTGTAACCAACAACATGATTTTAGCTGTTGTATGGATTGGTATTGTTGTTGCGTTACT
TCAGAACGTAGTTAAACAAAAAACAGCGGGCTACCAAGAAGTTGATTCAGCACAAACAACAACGTTAATGAACCGTGAAA
ACGCGATCGTTGTTGATGTTCGTTCTAAAGACGAATTCAAATCAGGCCACATTACGGATGCACGTCACATTTTACCAAGC
GACATCAAAGCGGGTAACTTAGCCGGTCTTGAAAACTCAAAAACTACCCCAATTATTGTTGTATGTAAGACGGGTCAAAC
AGCTCAAGCTGCTGCAAATGATTTGCATAAAGCAGGTTTTGAGCAAGTTAAACTGCTTAAAAACGGTTTGATCTCTTGGA
ATGAAGCTAACTTACCGTTAGTTAAAGGCAAAAAGTAA

Upstream 100 bases:

>100_bases
ATGAAGATACGCTAAGGTATACTTTCGCCTTAATTTTAGAGCCCATGGTAATGATGATATCTTATGATACGGAGTTGCCT
TAAAAATCAGAGAATAGAAT

Downstream 100 bases:

>100_bases
TTGTCGAATTCCTAGGCAACTAATTCATTTTGATGTGATATCTGGCTCATTTTTTGGATATTACGAATGCAGAGTGGCAT
GACATCGTTATTCTGCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
METSIIDFVTNNMILAVVWIGIVVALLQNVVKQKTAGYQEVDSAQTTTLMNRENAIVVDVRSKDEFKSGHITDARHILPS
DIKAGNLAGLENSKTTPIIVVCKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLVKGKK

Sequences:

>Translated_145_residues
METSIIDFVTNNMILAVVWIGIVVALLQNVVKQKTAGYQEVDSAQTTTLMNRENAIVVDVRSKDEFKSGHITDARHILPS
DIKAGNLAGLENSKTTPIIVVCKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLVKGKK
>Mature_145_residues
METSIIDFVTNNMILAVVWIGIVVALLQNVVKQKTAGYQEVDSAQTTTLMNRENAIVVDVRSKDEFKSGHITDARHILPS
DIKAGNLAGLENSKTTPIIVVCKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLVKGKK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=140, Percent_Identity=44.2857142857143, Blast_Score=126, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15737; Mature: 15737

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSIIDFVTNNMILAVVWIGIVVALLQNVVKQKTAGYQEVDSAQTTTLMNRENAIVVDV
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHEECCCCEEEEEE
RSKDEFKSGHITDARHILPSDIKAGNLAGLENSKTTPIIVVCKTGQTAQAAANDLHKAGF
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
EQVKLLKNGLISWNEANLPLVKGKK
HHHHHHHHCCCCCCCCCCCEECCCC
>Mature Secondary Structure
METSIIDFVTNNMILAVVWIGIVVALLQNVVKQKTAGYQEVDSAQTTTLMNRENAIVVDV
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHEECCCCEEEEEE
RSKDEFKSGHITDARHILPSDIKAGNLAGLENSKTTPIIVVCKTGQTAQAAANDLHKAGF
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
EQVKLLKNGLISWNEANLPLVKGKK
HHHHHHHHCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]