| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is metL [H]
Identifier: 209696154
GI number: 209696154
Start: 2974647
End: 2977067
Strand: Direct
Name: metL [H]
Synonym: VSAL_I2748
Alternate gene names: 209696154
Gene position: 2974647-2977067 (Clockwise)
Preceding gene: 209696153
Following gene: 209696155
Centisome position: 89.46
GC content: 42.09
Gene sequence:
>2421_bases ATGACAACGTCTTTGGTGCAACGTCAGTTACATAAATTTGGTGGCAGCAGTCTTTCTGATCCTGAGTGTTATCGCCGTGT GGCAACCATCTTAAAAGAATATTCAAACGAGCATGATCTTGTTGTTGTTTCTGCCGCGGGTAATACAACAAACCGTATTC TTGAATGGATTGATAACTTATCTAAAGATGGTCGTTTGGCTCACGATACATTGGAGTCTTTGCGTCATTATCAGCAACAG TTAATTTCTGAATTGTTAGAGCCAGATCAGGCGGAAGTATTGCAGGCATTGTTGCATAAAGAGTTGATTGCAATCGGTCA ATTACATGCTCCGCTAAATGAAGTTCAACAAGCCGATGTGCTTGGTCATGGTGAAATATGGTCGTCTCGTTTGTTGTCGG CTTATTTAAACCAGATTGAATTAAAATCGGCACCGTTGGATTCTCGCCATTTTTTAAGAGCAGAAAGAGGGGCTCAGCCT GAGGTTGATCGTGTTCTTTCATGGCCTTTATTTAAAGAACAAATAGCACAACACCCTCATGGCCGTCTTGTTATTACTGG ATTTATGGCCCGTGACCAAAAGGGTGAAACCGTATTATTAGGGCGTAATGGATCGGATTACTCAGCAACTATGATTGGTG CATTAGCTGAAGTTTCTCGTGTTACGATTTGGAGTGATGTTGCTGGGGTATTTAGTGCGGATCCTAGAAAAGTGGAAGAC GCTTGTTTATTGCCGCTACTTCGTTTGGATGAAGCCAGTGAATTGGCTCGTTTAGCTGCCCCTGTTTTACATAGCAGAAC ATTACAGCCAGTAGCGCAAAGTGCGTTAGATTTGAGTCTACGTTGCAGTTATCAACCAGAATCGGGTTCAACACGCATTG AACGTGTCTTGGCCTCTGGTCGTGGCGCTAAAATTGTTACTTCGTTGGATGATGTGTACTTAATTCAACTTGGCTTTGGC CGTGGGCAAGATTTTGAACGAGCTCAAACCGAGGTGCTTTCTCTTTTAACTCGTGCTCAACTTCAACCTCTTGCGTTAGA AGCACAAGCCGATAAATTTACTTTATTACTTGCCTACACTTCAGAGATCGTCAGTGATGCTTTAGATATGCTGCAAAATA CAGCGGTGCATGCTGAAATTAAATTAAAAGAAGGGTACTCAATGGTTGCAGCAGTAGGTGCTGGTGTAACGGCTAATGCC ATTCATAGCCATGGTTTTTACCATCAATTAAAAAATAGACCTTTAGAGTTTGTGTGTGAATCGGAATCAGGGTTAAGTCT TGTTGCTATTCTTCGTAAATTAGACACCGATGAATTGATCAATGAGATTCATACCAGTTTATTTCAAGCTCAGAAACGAG TTGGCCTTGTTTTGTGTGGTCACGGTAATATTGGTGCGCAGTGGCTTACATTGTTTACTCAGCAAAAACGAATTTTAGAA AAACGTCGAGGCATGATTTTTTCATTAGTCGGAGTCGTTGACAGTCATCGATACTGGTTCGATTTTGACGGTATCGATAG TGCATCGGTAGTCAGCCATTTTGATGATGAAGCGGTGAGCTACGAAGAATTTGAATGGATTGAAAAAATCGGTTCAGTCC AAGGATACGATGACGTTGTTATTTTAGATGTAACGGCAAGCTCTGAGCTTGCAAGTCAATACACTAAAATTGCAGAACAA GGCATGCACTTGATCTCTGCAAATAAGGTCGCTGGTTCAGCACCAAGTCATGAATATCAAGCGGTTGTTGATGCGTTTGC AAAAACCGGTCGACATTGGTTATACAATGCAACGGTTGGCGCGGGATTACCAATTAATCATACTGTGCAAGATTTGCGTG AAAGCGGAGACAGCATTGTTGCACTCTCTGGGATCTTTTCTGGCACTCTTTCTTGGTTATTCCAACAATATACTGGAGAG ACTCCCTTTACTGAGTTAGTCGATTTAGCATGGCAACAAGGATTGACAGAGCCAGATCCTAGGCATGATTTAGATGGTTC CGATGTAATGAGAAAGCTTGTTATTTTGGCAAGAGAGTCAGGGTTACAAATCGAACCGAATCAAATCGAAGTCGAATCGT TGGTTCCCGCCGAATTACAGCAAGTGAGTCTTGATGACTTCTTGGCAAAAGGTGATGCCTTAAATGAAGCATTATCGGAA CGTTTGGAACAAGCGCAGCGAGAACAAAAAGTACTTCGTTATGTTGCCCGTTTGAATAAAAATGGCAGTGCAACGGTTGG GATTGAAGCGCTGTCTGAACATCATGCATTGGCTAATTTATTACCGTGCGATAATATTTTTGCGATTGAAAGTCAGTGGT ATAAAGATAACCCTTTAGTGATAAGAGGGCCAGGCGCCGGAAGAGAGGTTACCGCTGGAGCAATCCAGTCTGATTTGAAT AAAATTTCAGCGTTATTTTAA
Upstream 100 bases:
>100_bases TGGTGCCGACGTTATTACGTATTTCTGTTGGCCTAGAAGACAGTAGAGATTTAATCGCAGATCTTACACAAGCGTTTGCT GTGGCTGCAGAGGTGAAATA
Downstream 100 bases:
>100_bases CCAAATGTAATACTTATTAACGTTTCGTTATATTTTAAACCATGCCATGTTGCATGGTTTTTTTCGTTTAACGTAGGAAA AATCGGAAACTATTGATATT
Product: bifunctional aspartate kinase II/homoserine dehydrogenase II
Products: NA
Alternate protein names: Aspartokinase II/homoserine dehydrogenase II; AKII-HDII; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 806; Mature: 805
Protein sequence:
>806_residues MTTSLVQRQLHKFGGSSLSDPECYRRVATILKEYSNEHDLVVVSAAGNTTNRILEWIDNLSKDGRLAHDTLESLRHYQQQ LISELLEPDQAEVLQALLHKELIAIGQLHAPLNEVQQADVLGHGEIWSSRLLSAYLNQIELKSAPLDSRHFLRAERGAQP EVDRVLSWPLFKEQIAQHPHGRLVITGFMARDQKGETVLLGRNGSDYSATMIGALAEVSRVTIWSDVAGVFSADPRKVED ACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSALDLSLRCSYQPESGSTRIERVLASGRGAKIVTSLDDVYLIQLGFG RGQDFERAQTEVLSLLTRAQLQPLALEAQADKFTLLLAYTSEIVSDALDMLQNTAVHAEIKLKEGYSMVAAVGAGVTANA IHSHGFYHQLKNRPLEFVCESESGLSLVAILRKLDTDELINEIHTSLFQAQKRVGLVLCGHGNIGAQWLTLFTQQKRILE KRRGMIFSLVGVVDSHRYWFDFDGIDSASVVSHFDDEAVSYEEFEWIEKIGSVQGYDDVVILDVTASSELASQYTKIAEQ GMHLISANKVAGSAPSHEYQAVVDAFAKTGRHWLYNATVGAGLPINHTVQDLRESGDSIVALSGIFSGTLSWLFQQYTGE TPFTELVDLAWQQGLTEPDPRHDLDGSDVMRKLVILARESGLQIEPNQIEVESLVPAELQQVSLDDFLAKGDALNEALSE RLEQAQREQKVLRYVARLNKNGSATVGIEALSEHHALANLLPCDNIFAIESQWYKDNPLVIRGPGAGREVTAGAIQSDLN KISALF
Sequences:
>Translated_806_residues MTTSLVQRQLHKFGGSSLSDPECYRRVATILKEYSNEHDLVVVSAAGNTTNRILEWIDNLSKDGRLAHDTLESLRHYQQQ LISELLEPDQAEVLQALLHKELIAIGQLHAPLNEVQQADVLGHGEIWSSRLLSAYLNQIELKSAPLDSRHFLRAERGAQP EVDRVLSWPLFKEQIAQHPHGRLVITGFMARDQKGETVLLGRNGSDYSATMIGALAEVSRVTIWSDVAGVFSADPRKVED ACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSALDLSLRCSYQPESGSTRIERVLASGRGAKIVTSLDDVYLIQLGFG RGQDFERAQTEVLSLLTRAQLQPLALEAQADKFTLLLAYTSEIVSDALDMLQNTAVHAEIKLKEGYSMVAAVGAGVTANA IHSHGFYHQLKNRPLEFVCESESGLSLVAILRKLDTDELINEIHTSLFQAQKRVGLVLCGHGNIGAQWLTLFTQQKRILE KRRGMIFSLVGVVDSHRYWFDFDGIDSASVVSHFDDEAVSYEEFEWIEKIGSVQGYDDVVILDVTASSELASQYTKIAEQ GMHLISANKVAGSAPSHEYQAVVDAFAKTGRHWLYNATVGAGLPINHTVQDLRESGDSIVALSGIFSGTLSWLFQQYTGE TPFTELVDLAWQQGLTEPDPRHDLDGSDVMRKLVILARESGLQIEPNQIEVESLVPAELQQVSLDDFLAKGDALNEALSE RLEQAQREQKVLRYVARLNKNGSATVGIEALSEHHALANLLPCDNIFAIESQWYKDNPLVIRGPGAGREVTAGAIQSDLN KISALF >Mature_805_residues TTSLVQRQLHKFGGSSLSDPECYRRVATILKEYSNEHDLVVVSAAGNTTNRILEWIDNLSKDGRLAHDTLESLRHYQQQL ISELLEPDQAEVLQALLHKELIAIGQLHAPLNEVQQADVLGHGEIWSSRLLSAYLNQIELKSAPLDSRHFLRAERGAQPE VDRVLSWPLFKEQIAQHPHGRLVITGFMARDQKGETVLLGRNGSDYSATMIGALAEVSRVTIWSDVAGVFSADPRKVEDA CLLPLLRLDEASELARLAAPVLHSRTLQPVAQSALDLSLRCSYQPESGSTRIERVLASGRGAKIVTSLDDVYLIQLGFGR GQDFERAQTEVLSLLTRAQLQPLALEAQADKFTLLLAYTSEIVSDALDMLQNTAVHAEIKLKEGYSMVAAVGAGVTANAI HSHGFYHQLKNRPLEFVCESESGLSLVAILRKLDTDELINEIHTSLFQAQKRVGLVLCGHGNIGAQWLTLFTQQKRILEK RRGMIFSLVGVVDSHRYWFDFDGIDSASVVSHFDDEAVSYEEFEWIEKIGSVQGYDDVVILDVTASSELASQYTKIAEQG MHLISANKVAGSAPSHEYQAVVDAFAKTGRHWLYNATVGAGLPINHTVQDLRESGDSIVALSGIFSGTLSWLFQQYTGET PFTELVDLAWQQGLTEPDPRHDLDGSDVMRKLVILARESGLQIEPNQIEVESLVPAELQQVSLDDFLAKGDALNEALSER LEQAQREQKVLRYVARLNKNGSATVGIEALSEHHALANLLPCDNIFAIESQWYKDNPLVIRGPGAGREVTAGAIQSDLNK ISALF
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=804, Percent_Identity=59.5771144278607, Blast_Score=959, Evalue=0.0, Organism=Escherichia coli, GI1786183, Length=839, Percent_Identity=28.3671036948748, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1790455, Length=456, Percent_Identity=25.219298245614, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322599, Length=251, Percent_Identity=37.0517928286853, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320893, Length=359, Percent_Identity=26.7409470752089, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 88964; Mature: 88832
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSLVQRQLHKFGGSSLSDPECYRRVATILKEYSNEHDLVVVSAAGNTTNRILEWIDNL CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCC SKDGRLAHDTLESLRHYQQQLISELLEPDQAEVLQALLHKELIAIGQLHAPLNEVQQADV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LGHGEIWSSRLLSAYLNQIELKSAPLDSRHFLRAERGAQPEVDRVLSWPLFKEQIAQHPH CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCC GRLVITGFMARDQKGETVLLGRNGSDYSATMIGALAEVSRVTIWSDVAGVFSADPRKVED CCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSALDLSLRCSYQPESGSTRIERVLASG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCC RGAKIVTSLDDVYLIQLGFGRGQDFERAQTEVLSLLTRAQLQPLALEAQADKFTLLLAYT CCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHH SEIVSDALDMLQNTAVHAEIKLKEGYSMVAAVGAGVTANAIHSHGFYHQLKNRPLEFVCE HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEC SESGLSLVAILRKLDTDELINEIHTSLFQAQKRVGLVLCGHGNIGAQWLTLFTQQKRILE CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH KRRGMIFSLVGVVDSHRYWFDFDGIDSASVVSHFDDEAVSYEEFEWIEKIGSVQGYDDVV HHCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCCCEE ILDVTASSELASQYTKIAEQGMHLISANKVAGSAPSHEYQAVVDAFAKTGRHWLYNATVG EEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC AGLPINHTVQDLRESGDSIVALSGIFSGTLSWLFQQYTGETPFTELVDLAWQQGLTEPDP CCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC RHDLDGSDVMRKLVILARESGLQIEPNQIEVESLVPAELQQVSLDDFLAKGDALNEALSE CCCCCHHHHHHHHHHHHHCCCCEECCCCEEHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH RLEQAQREQKVLRYVARLNKNGSATVGIEALSEHHALANLLPCDNIFAIESQWYKDNPLV HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEE IRGPGAGREVTAGAIQSDLNKISALF EECCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTSLVQRQLHKFGGSSLSDPECYRRVATILKEYSNEHDLVVVSAAGNTTNRILEWIDNL CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCC SKDGRLAHDTLESLRHYQQQLISELLEPDQAEVLQALLHKELIAIGQLHAPLNEVQQADV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LGHGEIWSSRLLSAYLNQIELKSAPLDSRHFLRAERGAQPEVDRVLSWPLFKEQIAQHPH CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCC GRLVITGFMARDQKGETVLLGRNGSDYSATMIGALAEVSRVTIWSDVAGVFSADPRKVED CCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSALDLSLRCSYQPESGSTRIERVLASG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCC RGAKIVTSLDDVYLIQLGFGRGQDFERAQTEVLSLLTRAQLQPLALEAQADKFTLLLAYT CCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHH SEIVSDALDMLQNTAVHAEIKLKEGYSMVAAVGAGVTANAIHSHGFYHQLKNRPLEFVCE HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEC SESGLSLVAILRKLDTDELINEIHTSLFQAQKRVGLVLCGHGNIGAQWLTLFTQQKRILE CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH KRRGMIFSLVGVVDSHRYWFDFDGIDSASVVSHFDDEAVSYEEFEWIEKIGSVQGYDDVV HHCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCCCEE ILDVTASSELASQYTKIAEQGMHLISANKVAGSAPSHEYQAVVDAFAKTGRHWLYNATVG EEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC AGLPINHTVQDLRESGDSIVALSGIFSGTLSWLFQQYTGETPFTELVDLAWQQGLTEPDP CCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC RHDLDGSDVMRKLVILARESGLQIEPNQIEVESLVPAELQQVSLDDFLAKGDALNEALSE CCCCCHHHHHHHHHHHHHCCCCEECCCCEEHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH RLEQAQREQKVLRYVARLNKNGSATVGIEALSEHHALANLLPCDNIFAIESQWYKDNPLV HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEE IRGPGAGREVTAGAIQSDLNKISALF EECCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6298218; 8346018; 9278503 [H]