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The map label for this gene is secA

Identifier: 209696045

GI number: 209696045

Start: 2851682

End: 2854405

Strand: Reverse

Name: secA

Synonym: VSAL_I2637

Alternate gene names: 209696045

Gene position: 2854405-2851682 (Counterclockwise)

Preceding gene: 209696047

Following gene: 209696044

Centisome position: 85.84

GC content: 38.47

Gene sequence:

>2724_bases
ATGTTTTCTAAAATCCTAACTAAAGTTATTGGTAGCCGTAATGATCGTACATTACGTAAGCTACGTAAAATTGTTGACCA
AATTAATAAACTTGAACCACAATTCGAATCATTACAAGACGAAGAATTAAAAGCGAAAACGATAGAGTTCCGTTCACGTT
TAGAACAAGGTGAATCTTTAGATGATTTACTGCCAGAAGCATTCGCAACAGTTCGTGAAGCTTCTAAGCGTTTATATGGC
ATGCGTCATTTTGATGTACAAATGATTGGCGGCATGGTGCTAAACGATAGCCAAATCGCAGAAATGCGTACAGGTGAAGG
TAAAACATTAACGGCAACCCTACCATGTTACTTAAATGCGTTAACAGGTAAAGGTGTTCATGTTGTTACTGTGAATGATT
ACCTTGCTAAGCGTGATGCAGAGACAAACCGCGAATTATTTGAATTCTTAGGCATGACAGTTGGTATTAATGTACCGAAT
ATGCCACCGCAAGAAAAAAAATTAGCTTATCAATCCGATATATTATACGGAACAAACAATGAGTTTGGTTTTGACTATCT
ACGTGACAACATGGCTTTCCGTGCTGAAGACCGTGTTCAACGTGAGCGTTATTTTGCGGTAATCGATGAAGTGGATTCCA
TTTTAATCGATGAAGCTCGTACTCCATTGATCATTTCTGGTCCTGCAGACGACAGTTCTGAACTATACACCCGTATCAAT
ATACTGATCCCTCAACTTGTTAAACAAGATGAAGAAGACAGCGAAGATTACCGTGGTGAAGGTCATTACACATTAGATGA
AAAAGGCAAGCAAACTCATTTAACTGAAAATGGTCAAGAATTTGTTGAACAATTACTAAAAGATGAAGGCTTAATGGAAG
AAGAGGATACGTTATATTCTCCTGCTAACATTAGTTTACTTCATCATATCAATGCGGCATTACGTGCTCATGTATTGTTT
GAAAAAGACGTCGATTATATTGTAAAAGACGATGAAGTTATCATCGTTGATGAACATACTGGCCGTACTATGCCTGGTCG
TCGTTGGTCTGAAGGGTTGCACCAAGCTGTAGAAGCGAAAGAAGGTGTGAAAATTCAAAATGAAAACCAAACATTAGCTT
CTATCACATTCCAAAACTTCTTCCGTTTATATGACAAACTATCTGGAATGACGGGTACCGCTGATACTGAAGCTTTTGAG
TTCCAATCTATTTATGGTTTAGATACGGTTGTTATCCCAACGAACCGTCCAATGACTCGTAATGACATGGGCGATTTGGT
CTACATGACTGAAGCTGAAAAATTTGCAGCTATCATTGAGGACATAAAAGCGTGTTCTGAACGTGGTCAGCCAGTATTGG
TTGGTACTGTTTCAATTGAAAAATCTGAATTACTTTCAAATGCATTGAAAACAGCAAAAATTAAGCACAACGTTCTTAAT
GCTAAGTTCCATGAACAAGAAGCCGATATCGTTGCTAATGCGGGTACGTCAAGCGCCGTAACTATTGCTACAAACATGGC
TGGTCGTGGTACTGATATCGTGTTGGGTGGTAACTGGCAAGCAGAAGTTGCTAAGTTAGATAATCCGTCTGCGGAACAAG
TTCAAACCATTAAAGCGGCTTGGAAAGAAGCGCATGATACGGTTTTGACTGCTGGTGGTCTTCATATTATTGGTACAGAA
CGTCATGAATCACGTCGTATTGATAATCAATTACGTGGTCGTGCTGGTCGTCAAGGTGATGCTGGTTCTTCACGTTTCTA
CTTATCAATGGAAGATGCGTTAATGCGTATCTTTGCTTCAGATCGTGTGTCTAACATGATGAAAAAGTTAGGTATGGAAG
AAGGCGAAGCGATTGAGCATCCTTGGGTAACTAAAGCGATAGAAAACGCACAACGTAAAGTTGAAGGTCGTAACTTCGAT
ATTCGTAAACAATTACTTGAATACGATGATGTTGCAAATGACCAACGTAAAGTCGTTTATGAATTACGTGATGAGTTAAT
GAACGTTGATGATATCAGTGAAATGATTAATCATAATCGTCAAGACGTACTTGAAGGGTTGTTTGGTCAGTATATTCCGC
CACAATCATTAGAAGAAATGTGGGATGTTGAAGGGTTAACGACTCGCCTACGCACTGATTTTGATTTGGATTTACCAATT
CAAGAATGGCTAGATAGCGATAATAAACTTCATGAAGATAACCTACGTGAAAAAATTATTGAAAGTGCATTCCAAGTTTA
TAAAGAGAAAGAAGAGTCTGTTGGCGAATCTGTTCTACGTAACTTTGAAAAAGCCGTGATGCTGCAAACGCTTGATGGAT
TATGGAAAGAGCACTTAGCGGCGATGGACCATTTACGTCAAGGTATTCATTTACGTGGTTATGCTCAAAAGAACCCGAAA
CAAGAATACAAGCGTGAGTCATTTGAGTTATTTGAAGGTTTACTTGATACGTTAAAATTAGATGTTGTTTCAATTTTAAG
TAAAGTTAGAGTTCAACAACAAGAAGATGTTGAACGTATGGAAGAGCAACGTCGTAAAAATGCAGAAGAAGTTGCTCGAC
TTCAAAAACTACAGCATCAAAATGCAGAAAATCAACTTGATGATGGTCATTCTTCAGATCAAAACCACTCACCAATGGTA
CGTGATGAACGTAAAGTTGGACGAAATGAAGTATGCCCATGTGGTTCAGGTAAAAAATACAAACAATGCCATGGTAAAAT
CTAG

Upstream 100 bases:

>100_bases
CGAAGAAGTATTTTTCTTAGAGTAATTTCTCTAGGTGATTGATTCAAATTTCAAATTAAACGATCTATTACGATCAAGAG
ATAAGAGAAGCAACGGAATC

Downstream 100 bases:

>100_bases
TCAGTCATTTACCTGCGCATGAATAAATAAAAAGCCGCTCTTGTTAGCGGCTTTTTTTATAGCGATACCGATTTAAAATT
GAAAAATATAGGGAAGATAA

Product: preprotein translocase subunit SecA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 907; Mature: 907

Protein sequence:

>907_residues
MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRSRLEQGESLDDLLPEAFATVREASKRLYG
MRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGINVPN
MPPQEKKLAYQSDILYGTNNEFGFDYLRDNMAFRAEDRVQRERYFAVIDEVDSILIDEARTPLIISGPADDSSELYTRIN
ILIPQLVKQDEEDSEDYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDEGLMEEEDTLYSPANISLLHHINAALRAHVLF
EKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFE
FQSIYGLDTVVIPTNRPMTRNDMGDLVYMTEAEKFAAIIEDIKACSERGQPVLVGTVSIEKSELLSNALKTAKIKHNVLN
AKFHEQEADIVANAGTSSAVTIATNMAGRGTDIVLGGNWQAEVAKLDNPSAEQVQTIKAAWKEAHDTVLTAGGLHIIGTE
RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSNMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFD
IRKQLLEYDDVANDQRKVVYELRDELMNVDDISEMINHNRQDVLEGLFGQYIPPQSLEEMWDVEGLTTRLRTDFDLDLPI
QEWLDSDNKLHEDNLREKIIESAFQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPK
QEYKRESFELFEGLLDTLKLDVVSILSKVRVQQQEDVERMEEQRRKNAEEVARLQKLQHQNAENQLDDGHSSDQNHSPMV
RDERKVGRNEVCPCGSGKKYKQCHGKI

Sequences:

>Translated_907_residues
MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRSRLEQGESLDDLLPEAFATVREASKRLYG
MRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGINVPN
MPPQEKKLAYQSDILYGTNNEFGFDYLRDNMAFRAEDRVQRERYFAVIDEVDSILIDEARTPLIISGPADDSSELYTRIN
ILIPQLVKQDEEDSEDYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDEGLMEEEDTLYSPANISLLHHINAALRAHVLF
EKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFE
FQSIYGLDTVVIPTNRPMTRNDMGDLVYMTEAEKFAAIIEDIKACSERGQPVLVGTVSIEKSELLSNALKTAKIKHNVLN
AKFHEQEADIVANAGTSSAVTIATNMAGRGTDIVLGGNWQAEVAKLDNPSAEQVQTIKAAWKEAHDTVLTAGGLHIIGTE
RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSNMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFD
IRKQLLEYDDVANDQRKVVYELRDELMNVDDISEMINHNRQDVLEGLFGQYIPPQSLEEMWDVEGLTTRLRTDFDLDLPI
QEWLDSDNKLHEDNLREKIIESAFQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPK
QEYKRESFELFEGLLDTLKLDVVSILSKVRVQQQEDVERMEEQRRKNAEEVARLQKLQHQNAENQLDDGHSSDQNHSPMV
RDERKVGRNEVCPCGSGKKYKQCHGKI
>Mature_907_residues
MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRSRLEQGESLDDLLPEAFATVREASKRLYG
MRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNALTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGINVPN
MPPQEKKLAYQSDILYGTNNEFGFDYLRDNMAFRAEDRVQRERYFAVIDEVDSILIDEARTPLIISGPADDSSELYTRIN
ILIPQLVKQDEEDSEDYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDEGLMEEEDTLYSPANISLLHHINAALRAHVLF
EKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFE
FQSIYGLDTVVIPTNRPMTRNDMGDLVYMTEAEKFAAIIEDIKACSERGQPVLVGTVSIEKSELLSNALKTAKIKHNVLN
AKFHEQEADIVANAGTSSAVTIATNMAGRGTDIVLGGNWQAEVAKLDNPSAEQVQTIKAAWKEAHDTVLTAGGLHIIGTE
RHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFASDRVSNMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFD
IRKQLLEYDDVANDQRKVVYELRDELMNVDDISEMINHNRQDVLEGLFGQYIPPQSLEEMWDVEGLTTRLRTDFDLDLPI
QEWLDSDNKLHEDNLREKIIESAFQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPK
QEYKRESFELFEGLLDTLKLDVVSILSKVRVQQQEDVERMEEQRRKNAEEVARLQKLQHQNAENQLDDGHSSDQNHSPMV
RDERKVGRNEVCPCGSGKKYKQCHGKI

Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secA family

Homologues:

Organism=Escherichia coli, GI1786287, Length=907, Percent_Identity=71.8853362734289, Blast_Score=1383, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECA_ALISL (B6ELG8)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263975.1
- GeneID:   6988871
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2637
- HOGENOM:   HBG284200
- OMA:   GGMVLHD
- ProtClustDB:   PRK12904
- GO:   GO:0005737
- HAMAP:   MF_01382
- InterPro:   IPR004027
- InterPro:   IPR000185
- InterPro:   IPR020937
- InterPro:   IPR011115
- InterPro:   IPR014018
- InterPro:   IPR011130
- InterPro:   IPR011116
- Gene3D:   G3DSA:1.10.3060.10
- PRINTS:   PR00906
- SMART:   SM00957
- SMART:   SM00958
- TIGRFAMs:   TIGR00963

Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW

EC number: NA

Molecular weight: Translated: 103451; Mature: 103451

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRSRLEQGESL
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCH
DDLLPEAFATVREASKRLYGMRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCHHHHHHHCCCCCEEEEEHHHHHHH
LTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGINVPNMPPQEKKLAYQSDILYGTNN
HCCCCEEEEEECHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHCEEECCCC
EFGFDYLRDNMAFRAEDRVQRERYFAVIDEVDSILIDEARTPLIISGPADDSSELYTRIN
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH
ILIPQLVKQDEEDSEDYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDEGLMEEEDTLYS
HHHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PANISLLHHINAALRAHVLFEKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
EGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFEFQSIYGLDTVVIPTNRPMTR
CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCC
NDMGDLVYMTEAEKFAAIIEDIKACSERGQPVLVGTVSIEKSELLSNALKTAKIKHNVLN
CCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHC
AKFHEQEADIVANAGTSSAVTIATNMAGRGTDIVLGGNWQAEVAKLDNPSAEQVQTIKAA
CHHHHCCHHHEECCCCCCEEEEEECCCCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHH
WKEAHDTVLTAGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS
HHHHHHHEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH
DRVSNMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFDIRKQLLEYDDVANDQRKVVY
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
ELRDELMNVDDISEMINHNRQDVLEGLFGQYIPPQSLEEMWDVEGLTTRLRTDFDLDLPI
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHCCCCCCCCCH
QEWLDSDNKLHEDNLREKIIESAFQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMDHLRQGIHLRGYAQKNPKQEYKRESFELFEGLLDTLKLDVVSILSKVRVQQQEDVERM
HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQRRKNAEEVARLQKLQHQNAENQLDDGHSSDQNHSPMVRDERKVGRNEVCPCGSGKKY
HHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHH
KQCHGKI
HHHCCCC
>Mature Secondary Structure
MFSKILTKVIGSRNDRTLRKLRKIVDQINKLEPQFESLQDEELKAKTIEFRSRLEQGESL
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCH
DDLLPEAFATVREASKRLYGMRHFDVQMIGGMVLNDSQIAEMRTGEGKTLTATLPCYLNA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCHHHHHHHCCCCCEEEEEHHHHHHH
LTGKGVHVVTVNDYLAKRDAETNRELFEFLGMTVGINVPNMPPQEKKLAYQSDILYGTNN
HCCCCEEEEEECHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHCEEECCCC
EFGFDYLRDNMAFRAEDRVQRERYFAVIDEVDSILIDEARTPLIISGPADDSSELYTRIN
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH
ILIPQLVKQDEEDSEDYRGEGHYTLDEKGKQTHLTENGQEFVEQLLKDEGLMEEEDTLYS
HHHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PANISLLHHINAALRAHVLFEKDVDYIVKDDEVIIVDEHTGRTMPGRRWSEGLHQAVEAK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
EGVKIQNENQTLASITFQNFFRLYDKLSGMTGTADTEAFEFQSIYGLDTVVIPTNRPMTR
CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCC
NDMGDLVYMTEAEKFAAIIEDIKACSERGQPVLVGTVSIEKSELLSNALKTAKIKHNVLN
CCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHC
AKFHEQEADIVANAGTSSAVTIATNMAGRGTDIVLGGNWQAEVAKLDNPSAEQVQTIKAA
CHHHHCCHHHEECCCCCCEEEEEECCCCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHH
WKEAHDTVLTAGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS
HHHHHHHEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH
DRVSNMMKKLGMEEGEAIEHPWVTKAIENAQRKVEGRNFDIRKQLLEYDDVANDQRKVVY
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
ELRDELMNVDDISEMINHNRQDVLEGLFGQYIPPQSLEEMWDVEGLTTRLRTDFDLDLPI
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHCCCCCCCCCH
QEWLDSDNKLHEDNLREKIIESAFQVYKEKEESVGESVLRNFEKAVMLQTLDGLWKEHLA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMDHLRQGIHLRGYAQKNPKQEYKRESFELFEGLLDTLKLDVVSILSKVRVQQQEDVERM
HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQRRKNAEEVARLQKLQHQNAENQLDDGHSSDQNHSPMVRDERKVGRNEVCPCGSGKKY
HHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHH
KQCHGKI
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA