| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is yacG [C]
Identifier: 209696043
GI number: 209696043
Start: 2850904
End: 2851113
Strand: Direct
Name: yacG [C]
Synonym: VSAL_I2635
Alternate gene names: 209696043
Gene position: 2850904-2851113 (Clockwise)
Preceding gene: 209696042
Following gene: 209696046
Centisome position: 85.74
GC content: 40.95
Gene sequence:
>210_bases ATGTCACAACCGAACAGTCAACAACCAACGATCGTGAAATGTCCAACTTGCCAAAACAAAGTCGTTTGGAATACAGAAAG TGAATTTCGCCCTTTTTGCAGCAAAAAATGCCAAATGATTGATTTTGGTGAATGGGCAGATGAAGAGAAGTCAATTGCTG GTGCACCTGATATGTCAGACTCTGATGGATGGTCATCAGAACCGTATTAA
Upstream 100 bases:
>100_bases GGGCATAAAAGTCGATTTGCGTTACGCTTTATGTCTTTTGAAACAAACAAGAATTGTGAAAAAGACATCGAGTTTACCCT TGCTGTCTGCTGAGGAAATT
Downstream 100 bases:
>100_bases TACGTCCATATAAATAGAAAAGGTGAATCTCAATGATTCACCTTTTCTATTCTATCCAGGTTCATATTTATCTTAAGTAA CATGTCATCACTTTATTTAA
Product: zinc-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSQPNSQQPTIVKCPTCQNKVVWNTESEFRPFCSKKCQMIDFGEWADEEKSIAGAPDMSDSDGWSSEPY
Sequences:
>Translated_69_residues MSQPNSQQPTIVKCPTCQNKVVWNTESEFRPFCSKKCQMIDFGEWADEEKSIAGAPDMSDSDGWSSEPY >Mature_68_residues SQPNSQQPTIVKCPTCQNKVVWNTESEFRPFCSKKCQMIDFGEWADEEKSIAGAPDMSDSDGWSSEPY
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
Organism=Escherichia coli, GI1786290, Length=57, Percent_Identity=63.1578947368421, Blast_Score=79, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2635_ALISL (B6ELG6)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002263973.1 - ProteinModelPortal: B6ELG6 - GeneID: 6987854 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2635 - HOGENOM: HBG552546 - OMA: EWADEEN - ProtClustDB: PRK00418 - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 7809; Mature: 7677
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPNSQQPTIVKCPTCQNKVVWNTESEFRPFCSKKCQMIDFGEWADEEKSIAGAPDMSD CCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC SDGWSSEPY CCCCCCCCC >Mature Secondary Structure SQPNSQQPTIVKCPTCQNKVVWNTESEFRPFCSKKCQMIDFGEWADEEKSIAGAPDMSD CCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC SDGWSSEPY CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA