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The map label for this gene is perM [H]

Identifier: 209695807

GI number: 209695807

Start: 2551746

End: 2552813

Strand: Reverse

Name: perM [H]

Synonym: VSAL_I2382

Alternate gene names: 209695807

Gene position: 2552813-2551746 (Counterclockwise)

Preceding gene: 209695808

Following gene: 209695804

Centisome position: 76.77

GC content: 39.42

Gene sequence:

>1068_bases
ATGTTAGACATGGTTACTCAATGGTATAAACGTCGTTTTTCCGATCCTCATGCTGTTAGCTTAGTGGCAATATTAGTCGT
CGGGTTTATTACTATTTATTTCTTTGGACATTTAATTGCGCCTTTATTGGTTGCTATTGTATTGGCTTATTTACTTGAAT
GGCCAGTCGCAAAGCTGAGTAAGTTTGGTTTACCAAGAACGCTTGCCGTTATGTTTGTTGTTTTGCTTTTTATTAGCCTG
ATGCTATTGGCTGTGTTTGGCCTTGTTCCTACTATTTGGAATCAAGTTGGTAATCTAATTAATGACATACCATCCATGTT
TAATGGGTTACACAGTTTATTATCAAGCTTGCCTGATCGTTATCCTGAATTCATCCAGCCTCAATCCATTGATACGTTAT
TAGACACCGTACGTGGCAAAGTATTAGGCATGGGAGAAACGATGGTTAAAGGGTCATTATCTTCTTTAATAAGTTTAGCC
GCATTAGGGGTATATCTTATCTTGGTTCCATTACTCGTTTTCTTCTTACTAAAAGATAAAGATGAAATGGTCAGAACGAT
GAGTAATATATTACCTAAAAATCGCCGTCTAGCGACGAAGGTTTGGGTTGAAATGAATGAACAAATTAGTAACTATATTC
GTGGCAAAGTCGTTGAGATTCTTATTGTAGGAACGGTGAGCTACGCTACCTTCTTTATTATGGATCTGCGTTACGCATTA
TTACTTGCCGTTATGGTTGGGTTTTCTGTGTTAATTCCTTATATTGGTGCCGCTGCTGTAACGGTTCCAATTGCAATTGT
TGCGTTATTTCAATGGGGGCTTACCCCCGATTTTTATTGGCTAATTCTTGCTTACGCTATTATTCAAGCATTGGATGGTA
ATGTGTTGGTGCCTGTTCTTTTCTCTGAAGCGGTAAACCTTCACCCTGTGGCGATCATTGTGTCAGTTTTAGTGTTTGGT
GGGCTGTGGGGGTTCTGGGGTGTATTCTTTGCGATTCCATTAGCGACACTGGTTAAAGCGGTTTGGAAAGCACTGCCAGC
AACCGATGAAGTCTTTAAAAAAGCGTAA

Upstream 100 bases:

>100_bases
CAGGATATGATGACATACTTTCAGCAATCCTCTTTCCATACTCATCTAGAGCAAGCTGAACCGTGTTCTTTTTTAACCGT
AACGAGAAGCAGAACTTAAT

Downstream 100 bases:

>100_bases
CAATCATTATTAGATAAAAGAAAGGCGGTGCTTTAGATGAGCACCGCCTTTTTTATTTTTCGTCTTTAAAAATGATTATT
TTTCGTTTAAATAATCCAGA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MLDMVTQWYKRRFSDPHAVSLVAILVVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLSKFGLPRTLAVMFVVLLFISL
MLLAVFGLVPTIWNQVGNLINDIPSMFNGLHSLLSSLPDRYPEFIQPQSIDTLLDTVRGKVLGMGETMVKGSLSSLISLA
ALGVYLILVPLLVFFLLKDKDEMVRTMSNILPKNRRLATKVWVEMNEQISNYIRGKVVEILIVGTVSYATFFIMDLRYAL
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLILAYAIIQALDGNVLVPVLFSEAVNLHPVAIIVSVLVFG
GLWGFWGVFFAIPLATLVKAVWKALPATDEVFKKA

Sequences:

>Translated_355_residues
MLDMVTQWYKRRFSDPHAVSLVAILVVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLSKFGLPRTLAVMFVVLLFISL
MLLAVFGLVPTIWNQVGNLINDIPSMFNGLHSLLSSLPDRYPEFIQPQSIDTLLDTVRGKVLGMGETMVKGSLSSLISLA
ALGVYLILVPLLVFFLLKDKDEMVRTMSNILPKNRRLATKVWVEMNEQISNYIRGKVVEILIVGTVSYATFFIMDLRYAL
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLILAYAIIQALDGNVLVPVLFSEAVNLHPVAIIVSVLVFG
GLWGFWGVFFAIPLATLVKAVWKALPATDEVFKKA
>Mature_355_residues
MLDMVTQWYKRRFSDPHAVSLVAILVVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLSKFGLPRTLAVMFVVLLFISL
MLLAVFGLVPTIWNQVGNLINDIPSMFNGLHSLLSSLPDRYPEFIQPQSIDTLLDTVRGKVLGMGETMVKGSLSSLISLA
ALGVYLILVPLLVFFLLKDKDEMVRTMSNILPKNRRLATKVWVEMNEQISNYIRGKVVEILIVGTVSYATFFIMDLRYAL
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLILAYAIIQALDGNVLVPVLFSEAVNLHPVAIIVSVLVFG
GLWGFWGVFFAIPLATLVKAVWKALPATDEVFKKA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=346, Percent_Identity=56.6473988439306, Blast_Score=394, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39377; Mature: 39377

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMVTQWYKRRFSDPHAVSLVAILVVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLS
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
KFGLPRTLAVMFVVLLFISLMLLAVFGLVPTIWNQVGNLINDIPSMFNGLHSLLSSLPDR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPEFIQPQSIDTLLDTVRGKVLGMGETMVKGSLSSLISLAALGVYLILVPLLVFFLLKDK
CHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DEMVRTMSNILPKNRRLATKVWVEMNEQISNYIRGKVVEILIVGTVSYATFFIMDLRYAL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLILAYAIIQALDGNVLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEHHHH
FSEAVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWKALPATDEVFKKA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure
MLDMVTQWYKRRFSDPHAVSLVAILVVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLS
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
KFGLPRTLAVMFVVLLFISLMLLAVFGLVPTIWNQVGNLINDIPSMFNGLHSLLSSLPDR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPEFIQPQSIDTLLDTVRGKVLGMGETMVKGSLSSLISLAALGVYLILVPLLVFFLLKDK
CHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DEMVRTMSNILPKNRRLATKVWVEMNEQISNYIRGKVVEILIVGTVSYATFFIMDLRYAL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLILAYAIIQALDGNVLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEHHHH
FSEAVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWKALPATDEVFKKA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]