Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695808

Identifier: 209695808

GI number: 209695808

Start: 2552815

End: 2553042

Strand: Reverse

Name: 209695808

Synonym: VSAL_I2383

Alternate gene names: NA

Gene position: 2553042-2552815 (Counterclockwise)

Preceding gene: 209695812

Following gene: 209695807

Centisome position: 76.78

GC content: 37.72

Gene sequence:

>228_bases
ATGGAAACCCAACACTTAGATTTATCAAAACACCGTTGTCCTATGTCTTTATTATTGGCTAAGCGTGCAAGTCACCGCTT
AATAGACAGCGAAAAATTAATCATTAAAGTCGTCGACAAAGTGTCTTTACAGGATATGATGACATACTTTCAGCAATCCT
CTTTCCATACTCATCTAGAGCAAGCTGAACCGTGTTCTTTTTTAACCGTAACGAGAAGCAGAACTTAA

Upstream 100 bases:

>100_bases
ATAAGAGTAGCAAATCTGTTATTGGTTTCTTTTCTGTCATAATTATGTGACTTATACTCTCTATACATGGAATCTATCAT
ATCTATAGTCGAGTCGTCGA

Downstream 100 bases:

>100_bases
TATGTTAGACATGGTTACTCAATGGTATAAACGTCGTTTTTCCGATCCTCATGCTGTTAGCTTAGTGGCAATATTAGTCG
TCGGGTTTATTACTATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
METQHLDLSKHRCPMSLLLAKRASHRLIDSEKLIIKVVDKVSLQDMMTYFQQSSFHTHLEQAEPCSFLTVTRSRT

Sequences:

>Translated_75_residues
METQHLDLSKHRCPMSLLLAKRASHRLIDSEKLIIKVVDKVSLQDMMTYFQQSSFHTHLEQAEPCSFLTVTRSRT
>Mature_75_residues
METQHLDLSKHRCPMSLLLAKRASHRLIDSEKLIIKVVDKVSLQDMMTYFQQSSFHTHLEQAEPCSFLTVTRSRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8744; Mature: 8744

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQHLDLSKHRCPMSLLLAKRASHRLIDSEKLIIKVVDKVSLQDMMTYFQQSSFHTHLE
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
QAEPCSFLTVTRSRT
CCCCCCEEEEECCCC
>Mature Secondary Structure
METQHLDLSKHRCPMSLLLAKRASHRLIDSEKLIIKVVDKVSLQDMMTYFQQSSFHTHLE
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
QAEPCSFLTVTRSRT
CCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA