| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cheY [H]
Identifier: 209695721
GI number: 209695721
Start: 2462804
End: 2463172
Strand: Reverse
Name: cheY [H]
Synonym: VSAL_I2289
Alternate gene names: 209695721
Gene position: 2463172-2462804 (Counterclockwise)
Preceding gene: 209695722
Following gene: 209695720
Centisome position: 74.08
GC content: 37.94
Gene sequence:
>369_bases ATGAAGATCCTTATTGTTGATGACTTCTCAACAATGCGCCGTATTGTAAAAAACTTATTACGTGACTTAGGTTTTAATAA CACCCAAGAAGCGGATGATGGTTTAACAGCATTACCATTGCTTAAAAAGGGCGGTTTCGATTTTGTAGTAACAGATTGGA ACATGCCAGGCATGCAAGGGATCGACTTGCTAAAAACAATTCGTGCCGATGGCGAATTAAAACATTTACCTGTATTAATG ATCACCGCTGAAGCAAAACGCGAGCAGATCATTGAAGCCGCTCAAGCGGGTGTTAATGGTTATATTGTTAAGCCATTTAC TGCTGCAACATTGAAAGAAAAATTAGACAAGATTTTTGAACGTTTATAA
Upstream 100 bases:
>100_bases AATCAATGCAACGACTACGGGCCAAGTTATCAACTTGGACAGTAGAATAATTAAATCCCGTTACTTTGTGCCCTCACTGG AGGCGATTTTGAATAAAAAC
Downstream 100 bases:
>100_bases GAAAGTGTTGCGTAAGTAAGGACCACCTAACAATGATTTCATTAACAGATGCCAAGGAACTTGTCGCTTTATTAGAAGAC GGCAAGCAAGAAGAAGCCAA
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPLLKKGGFDFVVTDWNMPGMQGIDLLKTIRADGELKHLPVLM ITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFERL
Sequences:
>Translated_122_residues MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPLLKKGGFDFVVTDWNMPGMQGIDLLKTIRADGELKHLPVLM ITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFERL >Mature_122_residues MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPLLKKGGFDFVVTDWNMPGMQGIDLLKTIRADGELKHLPVLM ITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFERL
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY is likely to be involved in changing the direction of flagellar rotation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=69.672131147541, Blast_Score=186, Evalue=3e-49, Organism=Escherichia coli, GI145693157, Length=122, Percent_Identity=36.8852459016393, Blast_Score=72, Evalue=1e-14, Organism=Escherichia coli, GI1786599, Length=121, Percent_Identity=29.7520661157025, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI1788550, Length=105, Percent_Identity=39.0476190476191, Blast_Score=66, Evalue=6e-13, Organism=Escherichia coli, GI1788521, Length=115, Percent_Identity=33.0434782608696, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1790437, Length=115, Percent_Identity=36.5217391304348, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1788713, Length=120, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1786784, Length=121, Percent_Identity=29.7520661157025, Blast_Score=59, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13673; Mature: 13673
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPLLKKGGFDFVVTDWNMPGMQG CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCCEEEECCCCCCCCH IDLLKTIRADGELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHH RL CC >Mature Secondary Structure MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPLLKKGGFDFVVTDWNMPGMQG CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCCEEEECCCCCCCCH IDLLKTIRADGELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHH RL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1560774; 10984043; 7860605 [H]