| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cheZ [H]
Identifier: 209695720
GI number: 209695720
Start: 2462052
End: 2462771
Strand: Reverse
Name: cheZ [H]
Synonym: VSAL_I2288
Alternate gene names: 209695720
Gene position: 2462771-2462052 (Counterclockwise)
Preceding gene: 209695721
Following gene: 209695719
Centisome position: 74.06
GC content: 40.69
Gene sequence:
>720_bases ATGATTTCATTAACAGATGCCAAGGAACTTGTCGCTTTATTAGAAGACGGCAAGCAAGAAGAAGCCAATCAATTGGTTGC CGCACTCGCCGTTCCTCAAGAGCAGCCAATGCTTCAAGAAATAGGATCTTTAACTCGTGATCTTCACGAATCATTAAAGA ACTTTAAACTTGATCACCGCGTTGTTGCTATTGCTAATGATGAGATCCCTGATGCACGTGATCGTTTGCAATATGTGATT GATAAAACGGAAATAGCCGGCAATAAAACCATGGATGCTGTTGATCGTTCATTACCTATTGCTGACGAGTTGCATGAAGG ACTTCTTCAGGTTCGTCCTCAATGGAATAGCCTAATGAAAGGTCGAATTGAGTTAGCTCAATTTAAATCTTTATGTCACA ACATTGATGGACTTCTTACTCAAGTTGAAGGTAATAGCTCGGAACTTCGTAACGAGTTAACCAACATTTTAATGGCGCAA GACTTTCAAGACCTTTCCGGTCAGATAATTAAACGTGTAATAACATTAGTTCAGGAAGTCGAAGACCGACTGGTTGATAT ATTGACGTTGTTTAAAGTTGAAGAACGCCTAGGTGCTGCAGAAGACGAATCTAAAAAACCGTCTAAAGCTGAGGGTCCTA TTTTGAACCCGCATGAACGTGAAGACGCTGTGGCATCGCAAGATGATGTCGATGATTTATTAGCCAGTCTTGGATTTTAG
Upstream 100 bases:
>100_bases ATATTGTTAAGCCATTTACTGCTGCAACATTGAAAGAAAAATTAGACAAGATTTTTGAACGTTTATAAGAAAGTGTTGCG TAAGTAAGGACCACCTAACA
Downstream 100 bases:
>100_bases AGGAATATTATGAGCTTTGAAATGGATGAAGACATTCTGCAAGATTTCTTAATTGAAGCAGGAGAAATTCTTGAGCTACT TTCTGAACAATTAGTTGAAT
Product: chemotaxis protein CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MISLTDAKELVALLEDGKQEEANQLVAALAVPQEQPMLQEIGSLTRDLHESLKNFKLDHRVVAIANDEIPDARDRLQYVI DKTEIAGNKTMDAVDRSLPIADELHEGLLQVRPQWNSLMKGRIELAQFKSLCHNIDGLLTQVEGNSSELRNELTNILMAQ DFQDLSGQIIKRVITLVQEVEDRLVDILTLFKVEERLGAAEDESKKPSKAEGPILNPHEREDAVASQDDVDDLLASLGF
Sequences:
>Translated_239_residues MISLTDAKELVALLEDGKQEEANQLVAALAVPQEQPMLQEIGSLTRDLHESLKNFKLDHRVVAIANDEIPDARDRLQYVI DKTEIAGNKTMDAVDRSLPIADELHEGLLQVRPQWNSLMKGRIELAQFKSLCHNIDGLLTQVEGNSSELRNELTNILMAQ DFQDLSGQIIKRVITLVQEVEDRLVDILTLFKVEERLGAAEDESKKPSKAEGPILNPHEREDAVASQDDVDDLLASLGF >Mature_239_residues MISLTDAKELVALLEDGKQEEANQLVAALAVPQEQPMLQEIGSLTRDLHESLKNFKLDHRVVAIANDEIPDARDRLQYVI DKTEIAGNKTMDAVDRSLPIADELHEGLLQVRPQWNSLMKGRIELAQFKSLCHNIDGLLTQVEGNSSELRNELTNILMAQ DFQDLSGQIIKRVITLVQEVEDRLVDILTLFKVEERLGAAEDESKKPSKAEGPILNPHEREDAVASQDDVDDLLASLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=205, Percent_Identity=36.5853658536585, Blast_Score=114, Evalue=6e-27,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 26681; Mature: 26681
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLTDAKELVALLEDGKQEEANQLVAALAVPQEQPMLQEIGSLTRDLHESLKNFKLDHR CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE VVAIANDEIPDARDRLQYVIDKTEIAGNKTMDAVDRSLPIADELHEGLLQVRPQWNSLMK EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH GRIELAQFKSLCHNIDGLLTQVEGNSSELRNELTNILMAQDFQDLSGQIIKRVITLVQEV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDRLVDILTLFKVEERLGAAEDESKKPSKAEGPILNPHEREDAVASQDDVDDLLASLGF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MISLTDAKELVALLEDGKQEEANQLVAALAVPQEQPMLQEIGSLTRDLHESLKNFKLDHR CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE VVAIANDEIPDARDRLQYVIDKTEIAGNKTMDAVDRSLPIADELHEGLLQVRPQWNSLMK EEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH GRIELAQFKSLCHNIDGLLTQVEGNSSELRNELTNILMAQDFQDLSGQIIKRVITLVQEV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDRLVDILTLFKVEERLGAAEDESKKPSKAEGPILNPHEREDAVASQDDVDDLLASLGF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860605; 10052136; 10984043 [H]