| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is cheA [H]
Identifier: 209695719
GI number: 209695719
Start: 2459871
End: 2462042
Strand: Reverse
Name: cheA [H]
Synonym: VSAL_I2287
Alternate gene names: 209695719
Gene position: 2462042-2459871 (Counterclockwise)
Preceding gene: 209695720
Following gene: 209695718
Centisome position: 74.04
GC content: 42.96
Gene sequence:
>2172_bases ATGAGCTTTGAAATGGATGAAGACATTCTGCAAGATTTCTTAATTGAAGCAGGAGAAATTCTTGAGCTACTTTCTGAACA ATTAGTTGAATTAGAGCAACGCCCTGATGATTCTGATTTATTAAATGCAATTTTCCGTGGTTTCCATACAGTAAAAGGGG GCGCAGGCTTCCTTTCATTAACTGAATTGGTTGATGCATGTCATGGTGCGGAGAATGTGTTTGATATCCTTCGTACTGGT AAACGCAAAGTTACCTCTGAGCTGATGGATACGATTCTAGAAACGCTAGATACCGTGAACGTTATGTTTGGTTCAGTGCA AAATGGTGAGCCTTTAGCGCCAGCATCGCAACAGGTTTTAGATGAGTTACATCGTCTAAGCAAGCCGACAAGCGAAGATG AAGTTTCCGTAGCTGCACCTGCACCAGCCGTTGTCGCTCCTGTGATCACTGCGACTTCAGCTATCCATGATTCTGTGGAT GACATTACAGAAGATGAATTTGAGAAACTGTTAGATGAATTGCACGGTAAAGGAACGGCACCTTCAGCGGTGACTTCTGC GCCAGTTGCGTCAACTCCTGTTTCTTCAAATACCGTGAGCTCTATGCCTGAAGGCGATATTACTGATGATGAATTTGAGC GTTTACTTGATGAGCTACATGGTTCAGGTAATAGCCCGACAAATTCATCGGTAGCGGCCGTGTCTGCTCCGGTTGTTGAC ACAAAATCAGCCGATATTGCGATGTCTGGTGATTCAGATGTAATGTCTGATGATGAGTTTGAAAAGTTATTAGATCAGCT GCACGGTTCTGGTAAAGGCCCAACAGATGAAGAGTTAGAACAAGCGGTTAAGCCTGCTTCTTCAATGGTAGAAACGCCAG TGGTAGAAAAAGCACCGGTAGTTGAAGCTCCGCTTGCGCCAACAAGAACACAAGCCCCAAAACCGGTTGAAGCACCTAAG CCAGTTCAAAAAGCGCCAACTAAACAACAGAAATCACAAGCAGAAAGCACGGTACGTGTTGATACATCAACGCTAGACAA CATCATGAACATGGTGGGTGAATTAGTATTGGTTCGTAACCGCTTAGTGAGTCTTGGTTTGAACAGCAATGACGAAGAAA TGTCTAAAGCAGTTTCAAACCTTGATGTCGTTACTGCTGATATCCAAGGCGCAGTAATGAAAACACGTATGCAGCCAATC AAGAAAGTATTTGGCCGCTTCCCACGTGTTGTTCGTGATTTAGCTCGTACTCTGAAAAAAGACATTGTGCTTGAAATGCG CGGTGAAGAAACGGATCTAGATAAAAACTTAGTGGAAGCACTTGCTGATCCATTGATTCACTTGGTTCGTAACTCTGTCG ATCATGGTATTGAAATGCCAGATGTTCGTGAAAAAACGGGCAAAGATCGTACCGGTAAAGTGATTCTGTCTGCTTCACAA GAAGGCGATCATATCTTACTAAGCATCATCGATGATGGTGGTGGTATGGACGCTGATAAGCTTCGTGGAATCGCGGTTAA TCGTGGTTTGATGGATACTGATGCAGCCTCTCGCCTTACGAACAAAGAATGTTATAACCTTATTTTTGCACCTGGTTTTT CAACGAAAACTGAAATCTCAGACATTTCAGGCCGTGGTGTAGGTATGGATGTTGTGAAGACAGCCATCAACCAATTAAAT GGGTCTATCGATATTGATTCAAGCATGGGCGAAGGGACTAAGATTGTAATCAAAGTACCATTAACACTCGCTATTCTTCC TACATTAATGGTAGGGGTTGCAAACCAGCCGTTTGCATTGCCACTAGCAAGTGTGAATGAGATTTTCCATCTTGATCTTT CTAAAACAAATATTGTTGATGGGCAGCTAACGACCATCGTTCGTGAAAAATCGATACCATTATTTTATTTACAAGATTGG CTTGTTTCTGGTGCTCGTAAAACAGAGCGCACGGGATTAGGTCATGTAGTCATTATTCAATTAGGTGCTCAACGCGTCGG TTTCGTGGTTGATACATTGATTGGACAAGAAGAGGTGGTAATTAAACCTCTTGATGAATTACTGCAAGGCACTCCAGGAA TGGCAGGTGCAACCATCACTTCAGATGGTCACATCGCACTTATTCTTGATGTTCCAAACTTGCTTAAGCGTTATGCAGTA CGTATGCATTAA
Upstream 100 bases:
>100_bases TGAGGGTCCTATTTTGAACCCGCATGAACGTGAAGACGCTGTGGCATCGCAAGATGATGTCGATGATTTATTAGCCAGTC TTGGATTTTAGAGGAATATT
Downstream 100 bases:
>100_bases TGCACAAGGATTGACATGGCAATAAAAGTATTAGTTGTTGATGATTCAAGCTTTTTTCGACGTCGAGTGAGTGAAATTAT CAACTCAGATCCACGCCTTG
Product: chemotaxis protein CheA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MSFEMDEDILQDFLIEAGEILELLSEQLVELEQRPDDSDLLNAIFRGFHTVKGGAGFLSLTELVDACHGAENVFDILRTG KRKVTSELMDTILETLDTVNVMFGSVQNGEPLAPASQQVLDELHRLSKPTSEDEVSVAAPAPAVVAPVITATSAIHDSVD DITEDEFEKLLDELHGKGTAPSAVTSAPVASTPVSSNTVSSMPEGDITDDEFERLLDELHGSGNSPTNSSVAAVSAPVVD TKSADIAMSGDSDVMSDDEFEKLLDQLHGSGKGPTDEELEQAVKPASSMVETPVVEKAPVVEAPLAPTRTQAPKPVEAPK PVQKAPTKQQKSQAESTVRVDTSTLDNIMNMVGELVLVRNRLVSLGLNSNDEEMSKAVSNLDVVTADIQGAVMKTRMQPI KKVFGRFPRVVRDLARTLKKDIVLEMRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDVREKTGKDRTGKVILSASQ EGDHILLSIIDDGGGMDADKLRGIAVNRGLMDTDAASRLTNKECYNLIFAPGFSTKTEISDISGRGVGMDVVKTAINQLN GSIDIDSSMGEGTKIVIKVPLTLAILPTLMVGVANQPFALPLASVNEIFHLDLSKTNIVDGQLTTIVREKSIPLFYLQDW LVSGARKTERTGLGHVVIIQLGAQRVGFVVDTLIGQEEVVIKPLDELLQGTPGMAGATITSDGHIALILDVPNLLKRYAV RMH
Sequences:
>Translated_723_residues MSFEMDEDILQDFLIEAGEILELLSEQLVELEQRPDDSDLLNAIFRGFHTVKGGAGFLSLTELVDACHGAENVFDILRTG KRKVTSELMDTILETLDTVNVMFGSVQNGEPLAPASQQVLDELHRLSKPTSEDEVSVAAPAPAVVAPVITATSAIHDSVD DITEDEFEKLLDELHGKGTAPSAVTSAPVASTPVSSNTVSSMPEGDITDDEFERLLDELHGSGNSPTNSSVAAVSAPVVD TKSADIAMSGDSDVMSDDEFEKLLDQLHGSGKGPTDEELEQAVKPASSMVETPVVEKAPVVEAPLAPTRTQAPKPVEAPK PVQKAPTKQQKSQAESTVRVDTSTLDNIMNMVGELVLVRNRLVSLGLNSNDEEMSKAVSNLDVVTADIQGAVMKTRMQPI KKVFGRFPRVVRDLARTLKKDIVLEMRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDVREKTGKDRTGKVILSASQ EGDHILLSIIDDGGGMDADKLRGIAVNRGLMDTDAASRLTNKECYNLIFAPGFSTKTEISDISGRGVGMDVVKTAINQLN GSIDIDSSMGEGTKIVIKVPLTLAILPTLMVGVANQPFALPLASVNEIFHLDLSKTNIVDGQLTTIVREKSIPLFYLQDW LVSGARKTERTGLGHVVIIQLGAQRVGFVVDTLIGQEEVVIKPLDELLQGTPGMAGATITSDGHIALILDVPNLLKRYAV RMH >Mature_722_residues SFEMDEDILQDFLIEAGEILELLSEQLVELEQRPDDSDLLNAIFRGFHTVKGGAGFLSLTELVDACHGAENVFDILRTGK RKVTSELMDTILETLDTVNVMFGSVQNGEPLAPASQQVLDELHRLSKPTSEDEVSVAAPAPAVVAPVITATSAIHDSVDD ITEDEFEKLLDELHGKGTAPSAVTSAPVASTPVSSNTVSSMPEGDITDDEFERLLDELHGSGNSPTNSSVAAVSAPVVDT KSADIAMSGDSDVMSDDEFEKLLDQLHGSGKGPTDEELEQAVKPASSMVETPVVEKAPVVEAPLAPTRTQAPKPVEAPKP VQKAPTKQQKSQAESTVRVDTSTLDNIMNMVGELVLVRNRLVSLGLNSNDEEMSKAVSNLDVVTADIQGAVMKTRMQPIK KVFGRFPRVVRDLARTLKKDIVLEMRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDVREKTGKDRTGKVILSASQE GDHILLSIIDDGGGMDADKLRGIAVNRGLMDTDAASRLTNKECYNLIFAPGFSTKTEISDISGRGVGMDVVKTAINQLNG SIDIDSSMGEGTKIVIKVPLTLAILPTLMVGVANQPFALPLASVNEIFHLDLSKTNIVDGQLTTIVREKSIPLFYLQDWL VSGARKTERTGLGHVVIIQLGAQRVGFVVDTLIGQEEVVIKPLDELLQGTPGMAGATITSDGHIALILDVPNLLKRYAVR MH
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Membrane (Potential). Note=It is not known whether CheA is actually membrane bound although CheA has two regions at the C-terminal end with the potential to be transmembrane regions [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=719, Percent_Identity=33.1015299026426, Blast_Score=314, Evalue=1e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 77749; Mature: 77618
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEMDEDILQDFLIEAGEILELLSEQLVELEQRPDDSDLLNAIFRGFHTVKGGAGFLSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH TELVDACHGAENVFDILRTGKRKVTSELMDTILETLDTVNVMFGSVQNGEPLAPASQQVL HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DELHRLSKPTSEDEVSVAAPAPAVVAPVITATSAIHDSVDDITEDEFEKLLDELHGKGTA HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC PSAVTSAPVASTPVSSNTVSSMPEGDITDDEFERLLDELHGSGNSPTNSSVAAVSAPVVD CCHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC TKSADIAMSGDSDVMSDDEFEKLLDQLHGSGKGPTDEELEQAVKPASSMVETPVVEKAPV CCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC VEAPLAPTRTQAPKPVEAPKPVQKAPTKQQKSQAESTVRVDTSTLDNIMNMVGELVLVRN CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHH RLVSLGLNSNDEEMSKAVSNLDVVTADIQGAVMKTRMQPIKKVFGRFPRVVRDLARTLKK HHHHCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIVLEMRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDVREKTGKDRTGKVILSASQ HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEECC EGDHILLSIIDDGGGMDADKLRGIAVNRGLMDTDAASRLTNKECYNLIFAPGFSTKTEIS CCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCHHHHEEEEECCCCCCCCHH DISGRGVGMDVVKTAINQLNGSIDIDSSMGEGTKIVIKVPLTLAILPTLMVGVANQPFAL HCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCC PLASVNEIFHLDLSKTNIVDGQLTTIVREKSIPLFYLQDWLVSGARKTERTGLGHVVIIQ CHHHHHHHEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCEEEEEE LGAQRVGFVVDTLIGQEEVVIKPLDELLQGTPGMAGATITSDGHIALILDVPNLLKRYAV ECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCHHHHHHHHH RMH CCC >Mature Secondary Structure SFEMDEDILQDFLIEAGEILELLSEQLVELEQRPDDSDLLNAIFRGFHTVKGGAGFLSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH TELVDACHGAENVFDILRTGKRKVTSELMDTILETLDTVNVMFGSVQNGEPLAPASQQVL HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DELHRLSKPTSEDEVSVAAPAPAVVAPVITATSAIHDSVDDITEDEFEKLLDELHGKGTA HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC PSAVTSAPVASTPVSSNTVSSMPEGDITDDEFERLLDELHGSGNSPTNSSVAAVSAPVVD CCHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC TKSADIAMSGDSDVMSDDEFEKLLDQLHGSGKGPTDEELEQAVKPASSMVETPVVEKAPV CCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC VEAPLAPTRTQAPKPVEAPKPVQKAPTKQQKSQAESTVRVDTSTLDNIMNMVGELVLVRN CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHH RLVSLGLNSNDEEMSKAVSNLDVVTADIQGAVMKTRMQPIKKVFGRFPRVVRDLARTLKK HHHHCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIVLEMRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDVREKTGKDRTGKVILSASQ HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEECC EGDHILLSIIDDGGGMDADKLRGIAVNRGLMDTDAASRLTNKECYNLIFAPGFSTKTEIS CCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCHHHHEEEEECCCCCCCCHH DISGRGVGMDVVKTAINQLNGSIDIDSSMGEGTKIVIKVPLTLAILPTLMVGVANQPFAL HCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCC PLASVNEIFHLDLSKTNIVDGQLTTIVREKSIPLFYLQDWLVSGARKTERTGLGHVVIIQ CHHHHHHHEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCEEEEEE LGAQRVGFVVDTLIGQEEVVIKPLDELLQGTPGMAGATITSDGHIALILDVPNLLKRYAV ECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCHHHHHHHHH RMH CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1938941; 9384377 [H]