Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695535

Identifier: 209695535

GI number: 209695535

Start: 2241398

End: 2241859

Strand: Reverse

Name: 209695535

Synonym: VSAL_I2091

Alternate gene names: NA

Gene position: 2241859-2241398 (Counterclockwise)

Preceding gene: 209695536

Following gene: 209695534

Centisome position: 67.42

GC content: 40.69

Gene sequence:

>462_bases
ATGAGACATATTCCAGCGTTAATCGATCTTCTTCCTCATGAAACGCCGTTAGCGTTAGTGGATGAATTGATCGAAGTCAG
TGAGTTATCGATTCATTGCCAAGTCACCATTAATGAAAATAATGTCTTTTTTAACCATGAGACTCACACGATTCCAGCTT
GGGTTGGGATTGAGTTTATGGCCCAAAGTGTGGCTGGTTGGTCTGGATACCACGCTTGGAAAAAAGGCAATAAGTCCCCG
ATAGGATTTTTACTTGGTAGCCGTAAGTATCAAGCAGAATGCAGTGAATTTAAGCAAGGCGACACACTCGACATTTTTGC
GGAACAAATATTAGAGAATAATGGCATGGCCGTGTTCAGTTGTTATATTAAACATAACGGTCAGCAATTGGCATCAAGCC
AATTAAATGTATTTGTACCGACAGAAGATAAATTAGAAGAGCTCTTAGCGCCAAAGCAGTAG

Upstream 100 bases:

>100_bases
TAAAGTTAGTGACTGACCAACGATTAGAAAAACCAGCGATTATCAGTAATTCATTTGCATTTGGTGGCAACAACATCAGC
TTAATTTTTGGGTACCAGTC

Downstream 100 bases:

>100_bases
TAGAGGAAATCATGATAAGACAAGTATTAGTGACCGGAGCAAGTAAAGGTATTGGTCGCGCAATTTCAGAGCAGTTAGCA
AAAGATGGTTTTCATGTGGT

Product: beta-hydroxydecanoyl-ACP dehydrase

Products: NA

Alternate protein names: Beta-Hydroxydecanoyl-ACP Dehydrase; 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase; Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; FabA-Like Domain-Containing Protein; 3-Hydroxy-Fatty Acyl-(Acyl Carrier Protein) Dehydratase; -Hydroxymyristoyl-[Acyl Carrier Protein] Dehydratase; Cation ABC Transporter Permease Protein; Beta-Ketoacyl Synthase

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRHIPALIDLLPHETPLALVDELIEVSELSIHCQVTINENNVFFNHETHTIPAWVGIEFMAQSVAGWSGYHAWKKGNKSP
IGFLLGSRKYQAECSEFKQGDTLDIFAEQILENNGMAVFSCYIKHNGQQLASSQLNVFVPTEDKLEELLAPKQ

Sequences:

>Translated_153_residues
MRHIPALIDLLPHETPLALVDELIEVSELSIHCQVTINENNVFFNHETHTIPAWVGIEFMAQSVAGWSGYHAWKKGNKSP
IGFLLGSRKYQAECSEFKQGDTLDIFAEQILENNGMAVFSCYIKHNGQQLASSQLNVFVPTEDKLEELLAPKQ
>Mature_153_residues
MRHIPALIDLLPHETPLALVDELIEVSELSIHCQVTINENNVFFNHETHTIPAWVGIEFMAQSVAGWSGYHAWKKGNKSP
IGFLLGSRKYQAECSEFKQGDTLDIFAEQILENNGMAVFSCYIKHNGQQLASSQLNVFVPTEDKLEELLAPKQ

Specific function: Unknown

COG id: COG4706

COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17208; Mature: 17208

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHIPALIDLLPHETPLALVDELIEVSELSIHCQVTINENNVFFNHETHTIPAWVGIEFM
CCCCCHHHHHCCCCCCHHHHHHHHHHHCEEEEEEEEECCCEEEECCCCCCCHHHHHHHHH
AQSVAGWSGYHAWKKGNKSPIGFLLGSRKYQAECSEFKQGDTLDIFAEQILENNGMAVFS
HHHHCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE
CYIKHNGQQLASSQLNVFVPTEDKLEELLAPKQ
EEEECCCHHHHCCCCEEEECCHHHHHHHHCCCC
>Mature Secondary Structure
MRHIPALIDLLPHETPLALVDELIEVSELSIHCQVTINENNVFFNHETHTIPAWVGIEFM
CCCCCHHHHHCCCCCCHHHHHHHHHHHCEEEEEEEEECCCEEEECCCCCCCHHHHHHHHH
AQSVAGWSGYHAWKKGNKSPIGFLLGSRKYQAECSEFKQGDTLDIFAEQILENNGMAVFS
HHHHCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE
CYIKHNGQQLASSQLNVFVPTEDKLEELLAPKQ
EEEECCCHHHHCCCCEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA