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The map label for this gene is ygeA [C]

Identifier: 209695461

GI number: 209695461

Start: 2145663

End: 2146376

Strand: Reverse

Name: ygeA [C]

Synonym: VSAL_I2004

Alternate gene names: 209695461

Gene position: 2146376-2145663 (Counterclockwise)

Preceding gene: 209695462

Following gene: 209695454

Centisome position: 64.55

GC content: 39.08

Gene sequence:

>714_bases
ATGAATAAAAAATTAGGTATTTTAGGTGGCATGGGGCCATTGGCAACGGTTGAATTTATGATGAAAATTATCACTCAAAC
GCCAGCACATAATGACCAAGAACACATCCCAATGGTTGTGAGTAGTGTTCCACAGATCCCAGATAGAACGGCATTTATCA
TGGGTCACGGCACTGACCCTTACCCAGAGCTAAAACACAGTTTTGATCAATTAGAGCAATCTGGTGCAGAGTGTATTGTT
ATTCCATGCAATACCGCGCATTACTGGTATCCGCAATTGAGTGCAACAAGCCATGTTCATACCATTAGTATTATTGATAG
CGTTGTACAAGAAACTCAATTACGTAAGCATAAAATCGTAGGCTTATTAGCAACAACGGCAACAATGAAAACCAAGATGT
ACCAACAAAAACTCAACCAATATAATATTGATGTGATTGAAACTGACGATTTACAACAACAAGCAGTAATGGCAGGAATT
TACGAAGTAAAAGCAGGTAATGTAGAGAAAGGGAAAGCGATGATGTTACCTGTTTTTGAAGATATGCTAGCCCAAGGCGC
AGAAGCGGTTATTTTTGGTTGTACTGAAATTCCAGTCGCATTGGCTGAACAAAATATGAATTCACCCAAGCAGTGCTTAG
ACTCACTAGAAATATTAGCAAAATATTGTGTTGAATGGTCTTATGAAGCAGAGCACACCGCACTAACAAGCTAA

Upstream 100 bases:

>100_bases
CCCGGCTTAACAGGGGTGGTTGTCGCCATTGGATTCGGATTCTTACTTGCTCCTATCGTTCTTTAAGTCTCATAAATACA
TATATTAAAGGAATCATATT

Downstream 100 bases:

>100_bases
ACTTACTCTTTACGATTCTTCTTCACTGATTTAACCGCCATAATGCCAAAGCCAATAAGTAACAATAACGGCAATAGCCA
AAGTACATAGGTTTTAGCAT

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNKKLGILGGMGPLATVEFMMKIITQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGTDPYPELKHSFDQLEQSGAECIV
IPCNTAHYWYPQLSATSHVHTISIIDSVVQETQLRKHKIVGLLATTATMKTKMYQQKLNQYNIDVIETDDLQQQAVMAGI
YEVKAGNVEKGKAMMLPVFEDMLAQGAEAVIFGCTEIPVALAEQNMNSPKQCLDSLEILAKYCVEWSYEAEHTALTS

Sequences:

>Translated_237_residues
MNKKLGILGGMGPLATVEFMMKIITQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGTDPYPELKHSFDQLEQSGAECIV
IPCNTAHYWYPQLSATSHVHTISIIDSVVQETQLRKHKIVGLLATTATMKTKMYQQKLNQYNIDVIETDDLQQQAVMAGI
YEVKAGNVEKGKAMMLPVFEDMLAQGAEAVIFGCTEIPVALAEQNMNSPKQCLDSLEILAKYCVEWSYEAEHTALTS
>Mature_237_residues
MNKKLGILGGMGPLATVEFMMKIITQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGTDPYPELKHSFDQLEQSGAECIV
IPCNTAHYWYPQLSATSHVHTISIIDSVVQETQLRKHKIVGLLATTATMKTKMYQQKLNQYNIDVIETDDLQQQAVMAGI
YEVKAGNVEKGKAMMLPVFEDMLAQGAEAVIFGCTEIPVALAEQNMNSPKQCLDSLEILAKYCVEWSYEAEHTALTS

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 26283; Mature: 26283

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLGILGGMGPLATVEFMMKIITQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGTDP
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCC
YPELKHSFDQLEQSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVVQETQLRKHKIV
CHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLATTATMKTKMYQQKLNQYNIDVIETDDLQQQAVMAGIYEVKAGNVEKGKAMMLPVFE
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHH
DMLAQGAEAVIFGCTEIPVALAEQNMNSPKQCLDSLEILAKYCVEWSYEAEHTALTS
HHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
>Mature Secondary Structure
MNKKLGILGGMGPLATVEFMMKIITQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGTDP
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCC
YPELKHSFDQLEQSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVVQETQLRKHKIV
CHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLATTATMKTKMYQQKLNQYNIDVIETDDLQQQAVMAGIYEVKAGNVEKGKAMMLPVFE
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHH
DMLAQGAEAVIFGCTEIPVALAEQNMNSPKQCLDSLEILAKYCVEWSYEAEHTALTS
HHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1705542 [H]