| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is fabG [H]
Identifier: 209695323
GI number: 209695323
Start: 1992080
End: 1992751
Strand: Reverse
Name: fabG [H]
Synonym: VSAL_I1856
Alternate gene names: 209695323
Gene position: 1992751-1992080 (Counterclockwise)
Preceding gene: 209695324
Following gene: 209695321
Centisome position: 59.93
GC content: 36.9
Gene sequence:
>672_bases ATGAAAATTGAGCACTCAACTATTCTAATCACATCAGCTGGTAATACGATGGGGAGAGCTATTTCCTGCCACTTTGCCGC CCTAGGTGCTCATCTTATTATTGCGGATTCAAACCTAAGTGATTTAGATAAAACTCATCAAATTTGTTCTGAACTTGGCA CTGATGTCGTTAGCTACCAATTAAAAGATGAAAGCACAGACAGTATTAGACACCTATTCCATGCTATCGATGAAGAATTT GGCTCAGGAATTGACGTTCTCATAAATAACTATATTGATGTCACTTTACCCAGCTTATTCGATACTCAAACTAATGACAG TCCATTGTTATTAACCAAACTCGCTTCCACTTTATTTAATTATGGGCAATTTGCAGCTCAAAATATGCGAAAACATAAAA AAGAAGGCGTTATCATCAATCTTGGGCATCATCAGAATGTCAACCAACCTTGTAGTTTAGATAACTCAAAAGCGTTATTA ACTGGGTTAACAAAACGTTGGGCTAAAGAGCTTAACCCTTTCAATATCCGAGTCGGAGGAGTCACACCTCGCTTATTTAA TAAAGTGTCGGCTCATACCGTTAATCTCATCAATCAAGAATTAATCAAAAATACAGAATATATCGTAGAAAATGATTACT TCAATGGCCGAATTCTCGAAGCAACCGCTTAA
Upstream 100 bases:
>100_bases TTAGTCGGACTTCACAGCAGATATTATATTTCTACCCCATTATTAGAGCATTCATTTACATTCATTAAAGTAATGAATAA CACTACGGGGAAAGAATAAA
Downstream 100 bases:
>100_bases TTATTCAACGTTTAAAATTACCCATGACTTTTCTTTAGGCATAAAAAAACCACCTCTATCTAATAGGTGGTTTTTTTATT AGTCAGGTACTTTCAAAATA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKIEHSTILITSAGNTMGRAISCHFAALGAHLIIADSNLSDLDKTHQICSELGTDVVSYQLKDESTDSIRHLFHAIDEEF GSGIDVLINNYIDVTLPSLFDTQTNDSPLLLTKLASTLFNYGQFAAQNMRKHKKEGVIINLGHHQNVNQPCSLDNSKALL TGLTKRWAKELNPFNIRVGGVTPRLFNKVSAHTVNLINQELIKNTEYIVENDYFNGRILEATA
Sequences:
>Translated_223_residues MKIEHSTILITSAGNTMGRAISCHFAALGAHLIIADSNLSDLDKTHQICSELGTDVVSYQLKDESTDSIRHLFHAIDEEF GSGIDVLINNYIDVTLPSLFDTQTNDSPLLLTKLASTLFNYGQFAAQNMRKHKKEGVIINLGHHQNVNQPCSLDNSKALL TGLTKRWAKELNPFNIRVGGVTPRLFNKVSAHTVNLINQELIKNTEYIVENDYFNGRILEATA >Mature_223_residues MKIEHSTILITSAGNTMGRAISCHFAALGAHLIIADSNLSDLDKTHQICSELGTDVVSYQLKDESTDSIRHLFHAIDEEF GSGIDVLINNYIDVTLPSLFDTQTNDSPLLLTKLASTLFNYGQFAAQNMRKHKKEGVIINLGHHQNVNQPCSLDNSKALL TGLTKRWAKELNPFNIRVGGVTPRLFNKVSAHTVNLINQELIKNTEYIVENDYFNGRILEATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24748; Mature: 24748
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEHSTILITSAGNTMGRAISCHFAALGAHLIIADSNLSDLDKTHQICSELGTDVVSYQ CCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCHHEEEE LKDESTDSIRHLFHAIDEEFGSGIDVLINNYIDVTLPSLFDTQTNDSPLLLTKLASTLFN ECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECHHHCCCCCCCCHHHHHHHHHHHH YGQFAAQNMRKHKKEGVIINLGHHQNVNQPCSLDNSKALLTGLTKRWAKELNPFNIRVGG HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC VTPRLFNKVSAHTVNLINQELIKNTEYIVENDYFNGRILEATA CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECC >Mature Secondary Structure MKIEHSTILITSAGNTMGRAISCHFAALGAHLIIADSNLSDLDKTHQICSELGTDVVSYQ CCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCHHEEEE LKDESTDSIRHLFHAIDEEFGSGIDVLINNYIDVTLPSLFDTQTNDSPLLLTKLASTLFN ECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECHHHCCCCCCCCHHHHHHHHHHHH YGQFAAQNMRKHKKEGVIINLGHHQNVNQPCSLDNSKALLTGLTKRWAKELNPFNIRVGG HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC VTPRLFNKVSAHTVNLINQELIKNTEYIVENDYFNGRILEATA CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]