Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695258

Identifier: 209695258

GI number: 209695258

Start: 1898601

End: 1898987

Strand: Reverse

Name: 209695258

Synonym: VSAL_I1781

Alternate gene names: NA

Gene position: 1898987-1898601 (Counterclockwise)

Preceding gene: 209695259

Following gene: 209695255

Centisome position: 57.11

GC content: 41.34

Gene sequence:

>387_bases
ATGAAAATTGCTCACAAACGTAAAGTACAGTCAAAGCTGCATAAACGTATTAAAGCAACTACACCAAAAACTGAAGTGAA
AAAAGCGGTTAAACCTGCAAAAGTAGCTAAACCAGTTGAGAAAAAAGTGGAAGCAGTAGTTGTTGCAGCACCTACAGTGG
CAGCAGTAGCGACGGACATCGCTCTAACGCCAAAGCAAAAGGCTGTATTTGATATTGTTTGCCAGAATCCTGAAGGTATC
AATTCAAAAGAGATTGGCGTAGCTGCTGGTCAAGAAGAAGCAAAAGCGGCAGCATGGGCGACAGGTGGCTTGAAAAAGCT
AGTTGAAGAAAACCTTGTTGTACGTGAACAACTTGCTGGTAATAAAGTAATTTACAAAGCAGCGTAA

Upstream 100 bases:

>100_bases
ACTATTTGAGTTTCATTTTAGGGATTGACATCTTTTTTCCGCTATCGTTTTCGAGCTTTATTGCTTTAAAATAGATATAG
CGCAACGGAGTTTAAGTTTC

Downstream 100 bases:

>100_bases
TGTTTTAGTAAGTCGCTTTAAGACACAAAAAAGCCGAGATTGCCTCGGCTTTTTTGTGTCTGTAACTTTGTGTTTGGTAA
GCGTGCGGGGAACTACACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKIAHKRKVQSKLHKRIKATTPKTEVKKAVKPAKVAKPVEKKVEAVVVAAPTVAAVATDIALTPKQKAVFDIVCQNPEGI
NSKEIGVAAGQEEAKAAAWATGGLKKLVEENLVVREQLAGNKVIYKAA

Sequences:

>Translated_128_residues
MKIAHKRKVQSKLHKRIKATTPKTEVKKAVKPAKVAKPVEKKVEAVVVAAPTVAAVATDIALTPKQKAVFDIVCQNPEGI
NSKEIGVAAGQEEAKAAAWATGGLKKLVEENLVVREQLAGNKVIYKAA
>Mature_128_residues
MKIAHKRKVQSKLHKRIKATTPKTEVKKAVKPAKVAKPVEKKVEAVVVAAPTVAAVATDIALTPKQKAVFDIVCQNPEGI
NSKEIGVAAGQEEAKAAAWATGGLKKLVEENLVVREQLAGNKVIYKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13627; Mature: 13627

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAHKRKVQSKLHKRIKATTPKTEVKKAVKPAKVAKPVEKKVEAVVVAAPTVAAVATDI
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHEEEEECCHHHHHHHHH
ALTPKQKAVFDIVCQNPEGINSKEIGVAAGQEEAKAAAWATGGLKKLVEENLVVREQLAG
CCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKVIYKAA
CEEEEECC
>Mature Secondary Structure
MKIAHKRKVQSKLHKRIKATTPKTEVKKAVKPAKVAKPVEKKVEAVVVAAPTVAAVATDI
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHEEEEECCHHHHHHHHH
ALTPKQKAVFDIVCQNPEGINSKEIGVAAGQEEAKAAAWATGGLKKLVEENLVVREQLAG
CCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKVIYKAA
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA