Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695149

Identifier: 209695149

GI number: 209695149

Start: 1750329

End: 1750532

Strand: Reverse

Name: 209695149

Synonym: VSAL_I1650

Alternate gene names: NA

Gene position: 1750532-1750329 (Counterclockwise)

Preceding gene: 209695150

Following gene: 209695148

Centisome position: 52.64

GC content: 45.59

Gene sequence:

>204_bases
TTGGCAGTTTCGCTTCGCTCAAGTATAGCCAAGCGTCGCTCACACCTTAATGTGGAGTTAGTTTACAAGAGTAGAAAAGG
GGTTTTATTTCGAGAGCTTGTCTGGTTATTGTGCTTTGCACCTGTTGGTTTGCTAATCACAGGAACTTTCCGGTGGCACT
ATATGGGAAGCGTTCGCGGTTGGGTTGTCACTTACTGGTTCTAA

Upstream 100 bases:

>100_bases
TACCAAAGAGGAGTTAAGCCGACTACTGTAAAGGCGTACAAAAAAATAAGTGTTTACGTAAAATTAAGCTAACAATGCAT
TTAAGAGTGATTCGCAATGC

Downstream 100 bases:

>100_bases
CTTTTTCGTGATAGTCCTTTGGTGTGGCTTCTTTTTCTTGGTGGCTAATCCGTGAATATTGGTTTTAGTCGTACTTGGTT
GTAAGGTTGGTCGAACGAAT

Product: membrane protein, phage gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MAVSLRSSIAKRRSHLNVELVYKSRKGVLFRELVWLLCFAPVGLLITGTFRWHYMGSVRGWVVTYWF

Sequences:

>Translated_67_residues
MAVSLRSSIAKRRSHLNVELVYKSRKGVLFRELVWLLCFAPVGLLITGTFRWHYMGSVRGWVVTYWF
>Mature_66_residues
AVSLRSSIAKRRSHLNVELVYKSRKGVLFRELVWLLCFAPVGLLITGTFRWHYMGSVRGWVVTYWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7890; Mature: 7758

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSLRSSIAKRRSHLNVELVYKSRKGVLFRELVWLLCFAPVGLLITGTFRWHYMGSVRG
CCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCC
WVVTYWF
EEEEEEC
>Mature Secondary Structure 
AVSLRSSIAKRRSHLNVELVYKSRKGVLFRELVWLLCFAPVGLLITGTFRWHYMGSVRG
CCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCC
WVVTYWF
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA