Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695150

Identifier: 209695150

GI number: 209695150

Start: 1750561

End: 1751307

Strand: Reverse

Name: 209695150

Synonym: VSAL_I1651

Alternate gene names: NA

Gene position: 1751307-1750561 (Counterclockwise)

Preceding gene: 209695151

Following gene: 209695149

Centisome position: 52.67

GC content: 32.53

Gene sequence:

>747_bases
TTGCATGGAAAAGGCAAGACCAATATTCGTGACTTTAATAGAAAACTAAACTCATTAAAATCTAATAAATTTAATAGATT
TAATAGATTAAACATAATCGAAAGGTATAATGTTTTAGCTAATTATTATGTCAAGAGTAAGATATTATCTGAATATTTTA
TTTTTCCTCTTAACATAGAGGCGTTTAATCAAGAATGCAAAAATACAATCTCTGATAAATATCTAACTATAACTAATCTT
CAGTTTATTTTGGAAGTAATGGATGCTTGTAAAGGATTCTACATCGTCCCTCACTCAAGTAAAAATTGTGGCTATATTAA
GTTGAAGCTAGCCAATGGAGGGAGACTTCAAGGACATGCTAACTGGATTGACAATGATTCAAACAATAGTGGAATTTCAT
ACTCTCTAAACTTGCCGAAGAAAAACTATCTTTTTACGGGAGATAAATGCTTTAAGTATTTACCTAAAATTCAAATGTCA
GCAAATTATAATGCTTTAATGGCATGCCACCATGGCGCTGAGGTCATTGACAGTGCCATTCCGAAATCAGCAAGTAGGAA
GGCAATAGCATGTTTCTCATTTGGTTTTAATAAAAGGTTCAAGCACCCTAGAAATAGCGCAATTCAACAAGCGTCAGAGT
ACAAGATTCAAGGTACTTGCAAATATCTTGATTGGTACCAAAGAGGAGTTAAGCCGACTACTGTAAAGGCGTACAAAAAA
ATAAGTGTTTACGTAAAATTAAGCTAA

Upstream 100 bases:

>100_bases
TCAGGTTACATATATTCTAACTAACCAGATTTGGCATAAGTCTTTTGAAAGAGACTGTTTTACTTTTATTACTCACTTCG
ATACAGACCATTACTCGTAT

Downstream 100 bases:

>100_bases
CAATGCATTTAAGAGTGATTCGCAATGCTTGGCAGTTTCGCTTCGCTCAAGTATAGCCAAGCGTCGCTCACACCTTAATG
TGGAGTTAGTTTACAAGAGT

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MHGKGKTNIRDFNRKLNSLKSNKFNRFNRLNIIERYNVLANYYVKSKILSEYFIFPLNIEAFNQECKNTISDKYLTITNL
QFILEVMDACKGFYIVPHSSKNCGYIKLKLANGGRLQGHANWIDNDSNNSGISYSLNLPKKNYLFTGDKCFKYLPKIQMS
ANYNALMACHHGAEVIDSAIPKSASRKAIACFSFGFNKRFKHPRNSAIQQASEYKIQGTCKYLDWYQRGVKPTTVKAYKK
ISVYVKLS

Sequences:

>Translated_248_residues
MHGKGKTNIRDFNRKLNSLKSNKFNRFNRLNIIERYNVLANYYVKSKILSEYFIFPLNIEAFNQECKNTISDKYLTITNL
QFILEVMDACKGFYIVPHSSKNCGYIKLKLANGGRLQGHANWIDNDSNNSGISYSLNLPKKNYLFTGDKCFKYLPKIQMS
ANYNALMACHHGAEVIDSAIPKSASRKAIACFSFGFNKRFKHPRNSAIQQASEYKIQGTCKYLDWYQRGVKPTTVKAYKK
ISVYVKLS
>Mature_248_residues
MHGKGKTNIRDFNRKLNSLKSNKFNRFNRLNIIERYNVLANYYVKSKILSEYFIFPLNIEAFNQECKNTISDKYLTITNL
QFILEVMDACKGFYIVPHSSKNCGYIKLKLANGGRLQGHANWIDNDSNNSGISYSLNLPKKNYLFTGDKCFKYLPKIQMS
ANYNALMACHHGAEVIDSAIPKSASRKAIACFSFGFNKRFKHPRNSAIQQASEYKIQGTCKYLDWYQRGVKPTTVKAYKK
ISVYVKLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28527; Mature: 28527

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGKGKTNIRDFNRKLNSLKSNKFNRFNRLNIIERYNVLANYYVKSKILSEYFIFPLNIE
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHH
AFNQECKNTISDKYLTITNLQFILEVMDACKGFYIVPHSSKNCGYIKLKLANGGRLQGHA
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCEECEEC
NWIDNDSNNSGISYSLNLPKKNYLFTGDKCFKYLPKIQMSANYNALMACHHGAEVIDSAI
CCCCCCCCCCCEEEEEECCCCCEEEECHHHHHHCCCEEECCCCCEEEEECCCHHHHHHHC
PKSASRKAIACFSFGFNKRFKHPRNSAIQQASEYKIQGTCKYLDWYQRGVKPTTVKAYKK
CCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHCEEEEEEHHHHHHHHCCCCCCCEEEEEE
ISVYVKLS
EEEEEEEC
>Mature Secondary Structure
MHGKGKTNIRDFNRKLNSLKSNKFNRFNRLNIIERYNVLANYYVKSKILSEYFIFPLNIE
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHH
AFNQECKNTISDKYLTITNLQFILEVMDACKGFYIVPHSSKNCGYIKLKLANGGRLQGHA
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCEECEEC
NWIDNDSNNSGISYSLNLPKKNYLFTGDKCFKYLPKIQMSANYNALMACHHGAEVIDSAI
CCCCCCCCCCCEEEEEECCCCCEEEECHHHHHHCCCEEECCCCCEEEEECCCHHHHHHHC
PKSASRKAIACFSFGFNKRFKHPRNSAIQQASEYKIQGTCKYLDWYQRGVKPTTVKAYKK
CCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHCEEEEEEHHHHHHHHCCCCCCCEEEEEE
ISVYVKLS
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA