Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694983

Identifier: 209694983

GI number: 209694983

Start: 1586175

End: 1586423

Strand: Reverse

Name: 209694983

Synonym: VSAL_I1470

Alternate gene names: NA

Gene position: 1586423-1586175 (Counterclockwise)

Preceding gene: 209694994

Following gene: 209694982

Centisome position: 47.71

GC content: 40.16

Gene sequence:

>249_bases
ATGACCACTAGAATTTTAGCCGATGTTGCAGCAAGCATTACCGAGTTTAAAGCTAACCCAATGAAAGTTGCTTCAAGTGC
TTACGGTGAAGCTGTTGCGATACTAAACAGGAATGAGCCTGCATTTTATTGTGTGCCAGCAGAAGCTTATGAACTATTGC
TGGATAGAGTTGAAGATCTAGAACTATTATCCCTTGCCGCAGAACGAGAGAATGAAGAAACTATTTCGGTAAACATCCAT
GACTTATAA

Upstream 100 bases:

>100_bases
GAAACCTTGAATGCCGAATCTAGTAAATCATGTTGATTGCTTTGTTAAACCGCAATGACACGCTATAATGACCGAATAAT
CAACCTAATTAGAGACCGTT

Downstream 100 bases:

>100_bases
GTTAGACTTCAAAAAGAGCGCATATAAAGAATGGAATAAACTCGGTGCAACACTTCGTGAGCAATTTAAGAAAAAGCTAT
TAGAACGCTTAGATAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Antitoxin Of xin-Antitoxin Stability System; Stability Protein StbD

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MTTRILADVAASITEFKANPMKVASSAYGEAVAILNRNEPAFYCVPAEAYELLLDRVEDLELLSLAAERENEETISVNIH
DL

Sequences:

>Translated_82_residues
MTTRILADVAASITEFKANPMKVASSAYGEAVAILNRNEPAFYCVPAEAYELLLDRVEDLELLSLAAERENEETISVNIH
DL
>Mature_81_residues
TTRILADVAASITEFKANPMKVASSAYGEAVAILNRNEPAFYCVPAEAYELLLDRVEDLELLSLAAERENEETISVNIHD
L

Specific function: Unknown

COG id: COG2161

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9041; Mature: 8910

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRILADVAASITEFKANPMKVASSAYGEAVAILNRNEPAFYCVPAEAYELLLDRVEDL
CCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHCCH
ELLSLAAERENEETISVNIHDL
HHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure 
TTRILADVAASITEFKANPMKVASSAYGEAVAILNRNEPAFYCVPAEAYELLLDRVEDL
CHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHCCH
ELLSLAAERENEETISVNIHDL
HHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA