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The map label for this gene is relE [H]

Identifier: 209694982

GI number: 209694982

Start: 1585901

End: 1586185

Strand: Reverse

Name: relE [H]

Synonym: VSAL_I1469

Alternate gene names: 209694982

Gene position: 1586185-1585901 (Counterclockwise)

Preceding gene: 209694983

Following gene: 209694980

Centisome position: 47.7

GC content: 38.25

Gene sequence:

>285_bases
ATGACTTATAAGTTAGACTTCAAAAAGAGCGCATATAAAGAATGGAATAAACTCGGTGCAACACTTCGTGAGCAATTTAA
GAAAAAGCTATTAGAACGCTTAGATAATCCTCACGTTCCTGCGTCAAAGCTATCAGGCGCTGACAATTTATACAAAATTA
AGCTACGACAGTCTGGTTACCGATTAGTATACAAAGTTGAGGATGACGTAATAATTGTCACCGTTTTAGCTGTTGGCAAA
AGAGAACGCAGCGACGTATACAAAAAAGCGATGCACAGGATTTGA

Upstream 100 bases:

>100_bases
GCAGAAGCTTATGAACTATTGCTGGATAGAGTTGAAGATCTAGAACTATTATCCCTTGCCGCAGAACGAGAGAATGAAGA
AACTATTTCGGTAAACATCC

Downstream 100 bases:

>100_bases
CCATGGCGGTTTAACGCCGCGTTGATGAATTTGTTATAATTTTATATATCAGCCATAGTCGGCAATTGACTACAGTTACG
AACCATTAAAATATTTATGC

Product: plasmid stabilisation system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTYKLDFKKSAYKEWNKLGATLREQFKKKLLERLDNPHVPASKLSGADNLYKIKLRQSGYRLVYKVEDDVIIVTVLAVGK
RERSDVYKKAMHRI

Sequences:

>Translated_94_residues
MTYKLDFKKSAYKEWNKLGATLREQFKKKLLERLDNPHVPASKLSGADNLYKIKLRQSGYRLVYKVEDDVIIVTVLAVGK
RERSDVYKKAMHRI
>Mature_93_residues
TYKLDFKKSAYKEWNKLGATLREQFKKKLLERLDNPHVPASKLSGADNLYKIKLRQSGYRLVYKVEDDVIIVTVLAVGKR
ERSDVYKKAMHRI

Specific function: Inhibits translation during amino acid starvation. Acts by cleaving mRNA with high codon specificity in the ribosomal A site. UGA is cleaved with fast rate while UAA and UGA are cleaved with intermediate and slow rate, respectively. mRNA cleavage can also

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787846, Length=94, Percent_Identity=59.5744680851064, Blast_Score=116, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007712
- InterPro:   IPR012753 [H]

Pfam domain/function: PF05016 Plasmid_stabil [H]

EC number: NA

Molecular weight: Translated: 11043; Mature: 10912

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYKLDFKKSAYKEWNKLGATLREQFKKKLLERLDNPHVPASKLSGADNLYKIKLRQSGY
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEECCCC
RLVYKVEDDVIIVTVLAVGKRERSDVYKKAMHRI
EEEEEECCCEEEEEEEHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TYKLDFKKSAYKEWNKLGATLREQFKKKLLERLDNPHVPASKLSGADNLYKIKLRQSGY
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEECCCC
RLVYKVEDDVIIVTVLAVGKRERSDVYKKAMHRI
EEEEEECCCEEEEEEEHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2990907; 9097039; 9278503; 9767574; 12526800 [H]