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The map label for this gene is asnC [H]

Identifier: 209694860

GI number: 209694860

Start: 1441205

End: 1442605

Strand: Reverse

Name: asnC [H]

Synonym: VSAL_I1329

Alternate gene names: 209694860

Gene position: 1442605-1441205 (Counterclockwise)

Preceding gene: 209694862

Following gene: 209694856

Centisome position: 43.38

GC content: 44.61

Gene sequence:

>1401_bases
ATGACTTACGCGCCTGTAACAGACGTATTAAGCGGCAAACTAGCGGTTGACAGTGAAGTAACTGTTCGCGGTTGGATCCG
TTCGCGTCGCGATTCTAAAGCGGGAATTTCATTCCTAGCTATTTATGACGGTTCTTGTTTCGATCCGATTCAGGCCGTGG
TTCCTAATGACTTAAATAATTACAATGAAGAAGTCCTAAAACTAACAACAGGTTGTTCTGTTGAAGTTACGGGGACTATC
GTTGCATCTCCTGCTAAAGGTCAAGATTTCGAACTTGCTGCAACCGCAGTAAAAGTCGTTGGTTTAGTTGAAGACCCAGA
TACCTACCCAATGGCGAAAACTCGTCACTCAATTGAGTATTTACGAGAAGTTGCTCACCTTCGCCCACGTACTAACGTGA
TTGGCGCGGTTGCACGTGTTCGTAACTGTTTGTCTCAAGCGATTCACCGTTTTTACCACGAGCAAGGTTACTTATGGATG
TCTGCACCACTAATCACATCATCTGATGCTGAAGGTGCTGGTGAGATGTTCCGCGTTTCGACATTAGATCACGCGAACGT
GCCTCTTGATGACAAAGGCAATGTTGATTACGACAAAGACTTCTTTGGTAAAGAGACATTCCTTACGGTATCTGGTCAAT
TAAATGCTGAAACTTACGCTTGTGCATTAAGCAAAGTGTACACATTTGGCCCGACTTTCCGTGCTGAAAACTCACACACA
AGTCGCCACCTAGCTGAATTCTGGATGGTTGAACCTGAGGTTGCTTTTGCTGACCTAGATGACGTTGCAAAACTGGCTGA
AGACATGCTTAAGTATGTATTCGAAGCGGTTCTTGCTGAGCGTCGTGATGATCTTGAATTCTTTGCTTCTCGCATTGATA
AAGAAGCAATCACTCGTCTAGAGCAATTTGTAAGTTCTGATTTTGCACAAGTAGATTACACTGACGCAATCCAAATCCTT
ATCGACTCTGGTAAGAAATTTGAATTTGACGTTGAGTGGGGCATCGATATGTCTTCTGAGCATGAGCGTTTCCTTGCTGA
AGAACATTTCAAAGCACCGGTTATCGTTAAAAACTACCCTAAAGACATTAAAGCATTCTACATGCGTCAAAATGACGATG
GTAAGACAGTTGCTGCGATGGATGTTCTTGCACCAGGCATTGGTGAGATCATCGGTGGTTCTCAACGTGAAGAGCGTTTA
GACGTTCTTGATGCACGTATGATTGAAATGGGTATCGACCCTGAACACATGACTTGGTACCGCGATTTACGTCGTTACGG
TACTGTACCTCACGCTGGCTTCGGTCTTGGTTTTGAGCGTCTAGTGTCTTACGTAACTGGTATGGGCAACGTTCGTGACG
TTATCCCGTTCCCACGTACTCCGCGTTCAGCTAACTTCTAA

Upstream 100 bases:

>100_bases
AGAGTAACAACACTTGAAGCTATTAATAAGAAAGGTAATATGTCTTCCTGAAATAAAAAATATTCGTGCATGTAGCACAA
CAATGGAGAATGTAATTAAC

Downstream 100 bases:

>100_bases
TTGGCTTTTTCTTATAGGGCACCAGCTTTGTAAGAATTCGTTCAATAGAAAGCAATGAATACAAAAATGGCGACCATAAT
GGTCGCCATTTTTTATGTTT

Product: asparaginyl-tRNA synthetase

Products: NA

Alternate protein names: Asparagine--tRNA ligase; AsnRS [H]

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MTYAPVTDVLSGKLAVDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNDLNNYNEEVLKLTTGCSVEVTGTI
VASPAKGQDFELAATAVKVVGLVEDPDTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWM
SAPLITSSDAEGAGEMFRVSTLDHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHT
SRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKEAITRLEQFVSSDFAQVDYTDAIQIL
IDSGKKFEFDVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFYMRQNDDGKTVAAMDVLAPGIGEIIGGSQREERL
DVLDARMIEMGIDPEHMTWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSANF

Sequences:

>Translated_466_residues
MTYAPVTDVLSGKLAVDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNDLNNYNEEVLKLTTGCSVEVTGTI
VASPAKGQDFELAATAVKVVGLVEDPDTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWM
SAPLITSSDAEGAGEMFRVSTLDHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHT
SRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKEAITRLEQFVSSDFAQVDYTDAIQIL
IDSGKKFEFDVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFYMRQNDDGKTVAAMDVLAPGIGEIIGGSQREERL
DVLDARMIEMGIDPEHMTWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSANF
>Mature_465_residues
TYAPVTDVLSGKLAVDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNDLNNYNEEVLKLTTGCSVEVTGTIV
ASPAKGQDFELAATAVKVVGLVEDPDTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWMS
APLITSSDAEGAGEMFRVSTLDHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHTS
RHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKEAITRLEQFVSSDFAQVDYTDAIQILI
DSGKKFEFDVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFYMRQNDDGKTVAAMDVLAPGIGEIIGGSQREERLD
VLDARMIEMGIDPEHMTWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSANF

Specific function: Unknown

COG id: COG0017

COG function: function code J; Aspartyl/asparaginyl-tRNA synthetases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI226491502, Length=462, Percent_Identity=42.4242424242424, Blast_Score=386, Evalue=1e-107,
Organism=Homo sapiens, GI4758762, Length=446, Percent_Identity=29.5964125560538, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI45439306, Length=342, Percent_Identity=28.3625730994152, Blast_Score=124, Evalue=2e-28,
Organism=Escherichia coli, GI1787161, Length=466, Percent_Identity=77.0386266094421, Blast_Score=778, Evalue=0.0,
Organism=Escherichia coli, GI1790571, Length=470, Percent_Identity=22.3404255319149, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789256, Length=471, Percent_Identity=22.2929936305732, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788173, Length=209, Percent_Identity=28.2296650717703, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17556372, Length=430, Percent_Identity=31.1627906976744, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI71984122, Length=455, Percent_Identity=29.010989010989, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17551876, Length=481, Percent_Identity=27.2349272349272, Blast_Score=116, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6319872, Length=470, Percent_Identity=37.4468085106383, Blast_Score=305, Evalue=8e-84,
Organism=Saccharomyces cerevisiae, GI6321807, Length=461, Percent_Identity=32.7548806941432, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6323011, Length=492, Percent_Identity=25, Blast_Score=112, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19922416, Length=462, Percent_Identity=35.2813852813853, Blast_Score=271, Evalue=8e-73,
Organism=Drosophila melanogaster, GI19921528, Length=462, Percent_Identity=29.4372294372294, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI17136276, Length=343, Percent_Identity=28.2798833819242, Blast_Score=107, Evalue=2e-23,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004364
- InterPro:   IPR018150
- InterPro:   IPR006195
- InterPro:   IPR004522
- InterPro:   IPR002312
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00152 tRNA-synt_2; PF01336 tRNA_anti [H]

EC number: =6.1.1.22 [H]

Molecular weight: Translated: 52291; Mature: 52159

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50862 AA_TRNA_LIGASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYAPVTDVLSGKLAVDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNDLNN
CCCCCCHHHHCCCEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCH
YNEEVLKLTTGCSVEVTGTIVASPAKGQDFELAATAVKVVGLVEDPDTYPMAKTRHSIEY
HHHHHHHEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHH
LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWMSAPLITSSDAEGAGEMFRVS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEEE
TLDHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHT
ECCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCH
SRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKEAITRL
HHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHH
EQFVSSDFAQVDYTDAIQILIDSGKKFEFDVEWGIDMSSEHERFLAEEHFKAPVIVKNYP
HHHHHCCCCCCCHHHHHHHEECCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCC
KDIKAFYMRQNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMIEMGIDPEHMTWY
HHHHEEEEEECCCCCEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
RDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSANF
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TYAPVTDVLSGKLAVDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNDLNN
CCCCCHHHHCCCEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCH
YNEEVLKLTTGCSVEVTGTIVASPAKGQDFELAATAVKVVGLVEDPDTYPMAKTRHSIEY
HHHHHHHEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHH
LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWMSAPLITSSDAEGAGEMFRVS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEEE
TLDHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHT
ECCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCH
SRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKEAITRL
HHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHH
EQFVSSDFAQVDYTDAIQILIDSGKKFEFDVEWGIDMSSEHERFLAEEHFKAPVIVKNYP
HHHHHCCCCCCCHHHHHHHEECCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCC
KDIKAFYMRQNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMIEMGIDPEHMTWY
HHHHEEEEEECCCCCEEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
RDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSANF
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA