| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is gltP [H]
Identifier: 209694856
GI number: 209694856
Start: 1435503
End: 1436786
Strand: Reverse
Name: gltP [H]
Synonym: VSAL_I1325
Alternate gene names: 209694856
Gene position: 1436786-1435503 (Counterclockwise)
Preceding gene: 209694860
Following gene: 209694855
Centisome position: 43.21
GC content: 41.51
Gene sequence:
>1284_bases ATGAAAAAATCACTTTCAAGTAGAATTTTTATAGGTTTATTCGCTGGCCTATTAATTGGTACCGCGATTCAATACCTGTT TAATGGGGTTGCGTTTTTTGATTCGTTCCTACTAGGAGCAGCAGAAGGCGTTGGTGGGATGTTTGTTTCACTCATCAAAT TACTTGTTGTTCCTCTCGTTTATGTCTCTATTGTTTGCGGTATCGTTGAACTAAAAGACATTGCTTCATTTGGTCGCCTT GGTGGGAAAACTTTTGCTCTTTACCTTATTAACACCATCATTGCGATAGCCGCAGCATTAACCGTCGGTATGATCTTTGC CCCTGGTGCAGATGCAAACTTAGCAGGAACCGTTGTCGTCGGCTCTGTTGAGCTAAAAGCAACGGAAACCCCGGACATCT TCTCACTCATTACGAATATCGTTCCTAGCAACCCTGTAGAGGCATTTGCTAGCGGTAATATGCTACAAATCATCTTTATG GCAATTTTAACGGGTCTTGCCATTCAAGCCCTTGATCATCGTGGGGGTCCTGCGATTAAAACGTTTAAAGTTGCCAATGA AATCATGATGAAGCTAATTAGCTTAGTGATGAGCCTCACTCCTTATGGTGTGTTTGCTCTGATGATTCAATTAGGTGCGA CGTTAGATGCAAATACCTTAATGTCAGTTGCAGGTTACGTGGCTCTTGTTGTTTCGATGCTTGTTTTCTGGATTTTTGTT TTTTATCCAATCATGGTTGGTTTATCAACTGGGATTTCACCTAAAACATTTTTACGTGCAGTACGTGAGCAAATTTTATT CTCACTTTCAACAGCAAGTTCAAATGCGACCATCCCTGTAACGATGCGAACATTAACTGAAAAGTTAAACGTATCTAAAT CTGTGGCCGGTTTTGGTGTTCCATTAGGCGCAACCATGAATATGTCTGGTGTCTCTATTTATATTGCTCTTGCCGCTATC TTTGTTGCTAATGCTTTTGGTCAACCTATCGACTCAGCGGATCTATTTACATTAGGCTTCACTATTCTATTACTTTCCAT TGGTGCTGGTGGTGTTCCGGGTGGTGGTGTTGTCATGGTCGGCGTTATTTTACACCAACTTGGCCTTCCGCCTGAAGGTC TTGCTATTGTGGCCGCGGTTGACCGTATTAACGATATGTTCTGTACTTCGTCTAATGTTGTTGGTGATACCGCAGTAAAT ACCATTGTTGCCAAATCAGAAGGTGAAATAGGTAAAGCAGAATCAACCACTGATGAAGTATTTACTGAAAAAGTAAACGG CTAG
Upstream 100 bases:
>100_bases TTAACGATATGTAAACATCCTGTTGATTTCTCAATTAATAGAGAAACATTACAAGGACTCACCTATTAGTGAGCACAATA TTCTGGAGAAAAAGTACATA
Downstream 100 bases:
>100_bases TTCTATATTTAGTATAAATATCAATATAAAGAGAGAGCTCGTTATGCTCTCTCTTTATATTCAGACATAAAGCATTTATA ATGTGACTACATTTTTTTTA
Product: proton glutamate symport protein
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MKKSLSSRIFIGLFAGLLIGTAIQYLFNGVAFFDSFLLGAAEGVGGMFVSLIKLLVVPLVYVSIVCGIVELKDIASFGRL GGKTFALYLINTIIAIAAALTVGMIFAPGADANLAGTVVVGSVELKATETPDIFSLITNIVPSNPVEAFASGNMLQIIFM AILTGLAIQALDHRGGPAIKTFKVANEIMMKLISLVMSLTPYGVFALMIQLGATLDANTLMSVAGYVALVVSMLVFWIFV FYPIMVGLSTGISPKTFLRAVREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVPLGATMNMSGVSIYIALAAI FVANAFGQPIDSADLFTLGFTILLLSIGAGGVPGGGVVMVGVILHQLGLPPEGLAIVAAVDRINDMFCTSSNVVGDTAVN TIVAKSEGEIGKAESTTDEVFTEKVNG
Sequences:
>Translated_427_residues MKKSLSSRIFIGLFAGLLIGTAIQYLFNGVAFFDSFLLGAAEGVGGMFVSLIKLLVVPLVYVSIVCGIVELKDIASFGRL GGKTFALYLINTIIAIAAALTVGMIFAPGADANLAGTVVVGSVELKATETPDIFSLITNIVPSNPVEAFASGNMLQIIFM AILTGLAIQALDHRGGPAIKTFKVANEIMMKLISLVMSLTPYGVFALMIQLGATLDANTLMSVAGYVALVVSMLVFWIFV FYPIMVGLSTGISPKTFLRAVREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVPLGATMNMSGVSIYIALAAI FVANAFGQPIDSADLFTLGFTILLLSIGAGGVPGGGVVMVGVILHQLGLPPEGLAIVAAVDRINDMFCTSSNVVGDTAVN TIVAKSEGEIGKAESTTDEVFTEKVNG >Mature_427_residues MKKSLSSRIFIGLFAGLLIGTAIQYLFNGVAFFDSFLLGAAEGVGGMFVSLIKLLVVPLVYVSIVCGIVELKDIASFGRL GGKTFALYLINTIIAIAAALTVGMIFAPGADANLAGTVVVGSVELKATETPDIFSLITNIVPSNPVEAFASGNMLQIIFM AILTGLAIQALDHRGGPAIKTFKVANEIMMKLISLVMSLTPYGVFALMIQLGATLDANTLMSVAGYVALVVSMLVFWIFV FYPIMVGLSTGISPKTFLRAVREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGVPLGATMNMSGVSIYIALAAI FVANAFGQPIDSADLFTLGFTILLLSIGAGGVPGGGVVMVGVILHQLGLPPEGLAIVAAVDRINDMFCTSSNVVGDTAVN TIVAKSEGEIGKAESTTDEVFTEKVNG
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=408, Percent_Identity=28.6764705882353, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI194239697, Length=425, Percent_Identity=27.7647058823529, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI21314632, Length=400, Percent_Identity=29.75, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI4827012, Length=280, Percent_Identity=30.7142857142857, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI169790839, Length=414, Percent_Identity=26.3285024154589, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI5032093, Length=383, Percent_Identity=31.331592689295, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI66773030, Length=268, Percent_Identity=30.2238805970149, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI223468564, Length=256, Percent_Identity=31.640625, Blast_Score=118, Evalue=9e-27, Organism=Homo sapiens, GI223468566, Length=256, Percent_Identity=31.640625, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI262359914, Length=373, Percent_Identity=25.7372654155496, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI301601644, Length=140, Percent_Identity=36.4285714285714, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1790514, Length=427, Percent_Identity=32.0843091334895, Blast_Score=194, Evalue=6e-51, Organism=Escherichia coli, GI1789947, Length=429, Percent_Identity=28.4382284382284, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1788024, Length=431, Percent_Identity=28.0742459396752, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789473, Length=228, Percent_Identity=30.2631578947368, Blast_Score=93, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71983106, Length=399, Percent_Identity=28.8220551378446, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71983099, Length=399, Percent_Identity=28.8220551378446, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17537407, Length=420, Percent_Identity=28.5714285714286, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI71996953, Length=422, Percent_Identity=26.5402843601896, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17541374, Length=393, Percent_Identity=28.498727735369, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI193206654, Length=422, Percent_Identity=27.2511848341232, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI193206505, Length=414, Percent_Identity=24.6376811594203, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI24583025, Length=428, Percent_Identity=26.1682242990654, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI17137668, Length=428, Percent_Identity=26.1682242990654, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24583023, Length=428, Percent_Identity=26.1682242990654, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI281360481, Length=315, Percent_Identity=26.031746031746, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281360483, Length=315, Percent_Identity=26.031746031746, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI17137666, Length=315, Percent_Identity=26.031746031746, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 44458; Mature: 44458
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLSSRIFIGLFAGLLIGTAIQYLFNGVAFFDSFLLGAAEGVGGMFVSLIKLLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YVSIVCGIVELKDIASFGRLGGKTFALYLINTIIAIAAALTVGMIFAPGADANLAGTVVV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE GSVELKATETPDIFSLITNIVPSNPVEAFASGNMLQIIFMAILTGLAIQALDHRGGPAIK EEEEEECCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH TFKVANEIMMKLISLVMSLTPYGVFALMIQLGATLDANTLMSVAGYVALVVSMLVFWIFV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FYPIMVGLSTGISPKTFLRAVREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCHHHHHCCCC PLGATMNMSGVSIYIALAAIFVANAFGQPIDSADLFTLGFTILLLSIGAGGVPGGGVVMV CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH GVILHQLGLPPEGLAIVAAVDRINDMFCTSSNVVGDTAVNTIVAKSEGEIGKAESTTDEV HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCHHHH FTEKVNG HHHHCCC >Mature Secondary Structure MKKSLSSRIFIGLFAGLLIGTAIQYLFNGVAFFDSFLLGAAEGVGGMFVSLIKLLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH YVSIVCGIVELKDIASFGRLGGKTFALYLINTIIAIAAALTVGMIFAPGADANLAGTVVV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE GSVELKATETPDIFSLITNIVPSNPVEAFASGNMLQIIFMAILTGLAIQALDHRGGPAIK EEEEEECCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH TFKVANEIMMKLISLVMSLTPYGVFALMIQLGATLDANTLMSVAGYVALVVSMLVFWIFV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FYPIMVGLSTGISPKTFLRAVREQILFSLSTASSNATIPVTMRTLTEKLNVSKSVAGFGV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCHHHHHCCCC PLGATMNMSGVSIYIALAAIFVANAFGQPIDSADLFTLGFTILLLSIGAGGVPGGGVVMV CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH GVILHQLGLPPEGLAIVAAVDRINDMFCTSSNVVGDTAVNTIVAKSEGEIGKAESTTDEV HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCHHHH FTEKVNG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]