Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694818

Identifier: 209694818

GI number: 209694818

Start: 1393885

End: 1394196

Strand: Direct

Name: 209694818

Synonym: VSAL_I1283

Alternate gene names: NA

Gene position: 1393885-1394196 (Clockwise)

Preceding gene: 209694817

Following gene: 209694819

Centisome position: 41.92

GC content: 33.01

Gene sequence:

>312_bases
GTGCGAGTTATTTCAAAACCAATTCTTATAGAGTTTTACTCAAATCCACTCTATAAAGATTCAGAAGAAGCATTAAAAGC
GTGGCACGATGAGGTTATTCAAGCAGATTGGAATACTCCTCATGAAATAAAAGCACAGTATACAAACGCAAGTATTGTAG
GAAATAAAAGGGTAGTTTTTAATATTTGTGGTAACAAATATAGATTGATTGTTTCAGTGAGCTATCGTTTAAAGGCTTTC
TACGTGAAGTTTGTAGGGACACATAAACAATATGATAACGTTGATGCCGAAACCATCGATTTATTCAAATAA

Upstream 100 bases:

>100_bases
ATTACTTTTTTACCTTTGATATTCCCAAAGCGGGAAAATCGAGTTGACATTTTGTACAGTTATTCCCATAATGGGAACTC
AATTATAGAACGGAGGCTAT

Downstream 100 bases:

>100_bases
CAATGCAGTGGTAATAAATTATGAATATTAAGCCAATTAGAACTAAAGATGATTACAAAGCAGCTATGGCTCGTATCAGT
GAGCTTACTAGCGGCGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVFNICGNKYRLIVSVSYRLKAF
YVKFVGTHKQYDNVDAETIDLFK

Sequences:

>Translated_103_residues
MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVFNICGNKYRLIVSVSYRLKAF
YVKFVGTHKQYDNVDAETIDLFK
>Mature_103_residues
MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVFNICGNKYRLIVSVSYRLKAF
YVKFVGTHKQYDNVDAETIDLFK

Specific function: Unknown

COG id: COG4680

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12045; Mature: 12045

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVF
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEEECCEEEECCCEEEE
NICGNKYRLIVSVSYRLKAFYVKFVGTHKQYDNVDAETIDLFK
EECCCEEEEEEEEECEEEEEEEEEECCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVF
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEEECCEEEECCCEEEE
NICGNKYRLIVSVSYRLKAFYVKFVGTHKQYDNVDAETIDLFK
EECCCEEEEEEEEECEEEEEEEEEECCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA