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The map label for this gene is yulF [H]

Identifier: 209694755

GI number: 209694755

Start: 1318900

End: 1319895

Strand: Direct

Name: yulF [H]

Synonym: VSAL_I1210

Alternate gene names: 209694755

Gene position: 1318900-1319895 (Clockwise)

Preceding gene: 209694750

Following gene: 209694756

Centisome position: 39.66

GC content: 40.26

Gene sequence:

>996_bases
ATGACAGAGAAAAAAATAAAGTGGGGCATTGCAGGGCTTGGAAACATAGCGCACCGATTTGCTCAAGACTTAACAAGCAA
CAGTCAATGTGGAGAATTACAGGCCGTTGCTGCTAGAGATGTTGATAAAGCAGAGCGGTTTGCTACCCGTTATAAGGCGG
TATCTCATTATGGTGATTATGAACAATTAGCGACGGATCCTACCGTTGATATTGTTTATGTCGCGACAATTCATCCTTAT
CATAGACCCTTAGTGGAATTGTTTCTTTCTCACCATAAACACGTTTTAGTTGAAAAGCCTGCGTTTACTAATTACCAAGA
TTGGCAAGACATGCAGAAACTTGCTAAAGATAGCGGAGTGTTATTGCTTGAGGCGATGAAAACTGTTGTGTTCCCCGCTT
ATCGAGAGTTGAAGACTTTTATGAATGAACACAAGATTGTCGTGGATTCCATAGAAGCCTCTTTCGGTAATGAAAGTGTG
TATGATCCTAATATATTTGTATTTAATCCTGAATTGTCAGGGGGAGCGACACTCGATGTCGGGGTATACGGCGTTTGGTT
TTACTGTGATTTATGCCATTTCTTTGGTGAAGATGTCCCAACACCGTCGGTCTCTATTACCGCAGAACACCCTGAATGGA
GAGTTGATGAAAACGTGGAGTTTTTATTTGATGGAAAGATGAAAGGAAAAATAGGGGCGTCAATTTCAAAAAACTTACCA
AGGAGCGCGATTTTAAAAGGCGATGGTGTTGAGATCGTCATACATGATAAATGGTGGAACCCTTCACGAATTGATGTTCA
TTTAAGAGGTCAAACTCACACCATTACGCATAGCTGTGGTGGAGGGTTTGAACATGAAATAGATTACTGTTCAGAGTTAT
TATTAAACAATGCTCAAACTTCCTCAGTGCTTAATACTGAAATCAGTGGGCAGGTATTGTCTATACTAGAGCAAGCGTTA
ATCACCAACGGATATACACATTTAACGAAAAGATAA

Upstream 100 bases:

>100_bases
TTGGCTATTTTTAAATAGGAACAAGTGTGCTTATTTGTTCTATTTTTCTTTTACGTTGAGGTGACTACACTGTCTCGATT
AAAAATAATAGGATGAGGTA

Downstream 100 bases:

>100_bases
AATTGGGTGCAATGGAGAATATAAAAAGAAAACTAGAGGTTTATGAAATACTTTTTCGTAAGTATGGACCAGTAGCATCA
AGCTGTAATATTACAGAGCT

Product: NADP or NAD utilising oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTEKKIKWGIAGLGNIAHRFAQDLTSNSQCGELQAVAARDVDKAERFATRYKAVSHYGDYEQLATDPTVDIVYVATIHPY
HRPLVELFLSHHKHVLVEKPAFTNYQDWQDMQKLAKDSGVLLLEAMKTVVFPAYRELKTFMNEHKIVVDSIEASFGNESV
YDPNIFVFNPELSGGATLDVGVYGVWFYCDLCHFFGEDVPTPSVSITAEHPEWRVDENVEFLFDGKMKGKIGASISKNLP
RSAILKGDGVEIVIHDKWWNPSRIDVHLRGQTHTITHSCGGGFEHEIDYCSELLLNNAQTSSVLNTEISGQVLSILEQAL
ITNGYTHLTKR

Sequences:

>Translated_331_residues
MTEKKIKWGIAGLGNIAHRFAQDLTSNSQCGELQAVAARDVDKAERFATRYKAVSHYGDYEQLATDPTVDIVYVATIHPY
HRPLVELFLSHHKHVLVEKPAFTNYQDWQDMQKLAKDSGVLLLEAMKTVVFPAYRELKTFMNEHKIVVDSIEASFGNESV
YDPNIFVFNPELSGGATLDVGVYGVWFYCDLCHFFGEDVPTPSVSITAEHPEWRVDENVEFLFDGKMKGKIGASISKNLP
RSAILKGDGVEIVIHDKWWNPSRIDVHLRGQTHTITHSCGGGFEHEIDYCSELLLNNAQTSSVLNTEISGQVLSILEQAL
ITNGYTHLTKR
>Mature_330_residues
TEKKIKWGIAGLGNIAHRFAQDLTSNSQCGELQAVAARDVDKAERFATRYKAVSHYGDYEQLATDPTVDIVYVATIHPYH
RPLVELFLSHHKHVLVEKPAFTNYQDWQDMQKLAKDSGVLLLEAMKTVVFPAYRELKTFMNEHKIVVDSIEASFGNESVY
DPNIFVFNPELSGGATLDVGVYGVWFYCDLCHFFGEDVPTPSVSITAEHPEWRVDENVEFLFDGKMKGKIGASISKNLPR
SAILKGDGVEIVIHDKWWNPSRIDVHLRGQTHTITHSCGGGFEHEIDYCSELLLNNAQTSSVLNTEISGQVLSILEQALI
TNGYTHLTKR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=332, Percent_Identity=29.2168674698795, Blast_Score=134, Evalue=9e-32,
Organism=Escherichia coli, GI145693182, Length=205, Percent_Identity=27.3170731707317, Blast_Score=77, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24581117, Length=273, Percent_Identity=29.3040293040293, Blast_Score=114, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24581115, Length=261, Percent_Identity=26.8199233716475, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24584727, Length=263, Percent_Identity=28.5171102661597, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37198; Mature: 37067

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKKIKWGIAGLGNIAHRFAQDLTSNSQCGELQAVAARDVDKAERFATRYKAVSHYGDY
CCCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCH
EQLATDPTVDIVYVATIHPYHRPLVELFLSHHKHVLVEKPAFTNYQDWQDMQKLAKDSGV
HHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCE
LLLEAMKTVVFPAYRELKTFMNEHKIVVDSIEASFGNESVYDPNIFVFNPELSGGATLDV
EHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCEEEH
GVYGVWFYCDLCHFFGEDVPTPSVSITAEHPEWRVDENVEFLFDGKMKGKIGASISKNLP
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHCCC
RSAILKGDGVEIVIHDKWWNPSRIDVHLRGQTHTITHSCGGGFEHEIDYCSELLLNNAQT
HHHEECCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCH
SSVLNTEISGQVLSILEQALITNGYTHLTKR
HHHHCCCCCHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
TEKKIKWGIAGLGNIAHRFAQDLTSNSQCGELQAVAARDVDKAERFATRYKAVSHYGDY
CCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCH
EQLATDPTVDIVYVATIHPYHRPLVELFLSHHKHVLVEKPAFTNYQDWQDMQKLAKDSGV
HHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCE
LLLEAMKTVVFPAYRELKTFMNEHKIVVDSIEASFGNESVYDPNIFVFNPELSGGATLDV
EHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCEEEH
GVYGVWFYCDLCHFFGEDVPTPSVSITAEHPEWRVDENVEFLFDGKMKGKIGASISKNLP
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHCCC
RSAILKGDGVEIVIHDKWWNPSRIDVHLRGQTHTITHSCGGGFEHEIDYCSELLLNNAQT
HHHEECCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCH
SSVLNTEISGQVLSILEQALITNGYTHLTKR
HHHHCCCCCHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]