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The map label for this gene is yjjU [H]

Identifier: 209694750

GI number: 209694750

Start: 1312374

End: 1314290

Strand: Direct

Name: yjjU [H]

Synonym: VSAL_I1204

Alternate gene names: 209694750

Gene position: 1312374-1314290 (Clockwise)

Preceding gene: 209694748

Following gene: 209694755

Centisome position: 39.47

GC content: 38.45

Gene sequence:

>1917_bases
ATGGGCGAACATTATTCGATCAGTAAACAAAATTATGATGTGTTTCGTGTACCTAAAACAAAAGTCGATAAGATTGCTTT
AGTGACAGAAGGTGGTGGTCAAAGGGGGATTTTCACCGCAGGAGTGCTGGATACGTTTTTAGAAGCCAAATTCAATCCAT
TTGCTTTATTGATTGGAACATCGGCAGGTTCGTTGAATTTGGCCTCTTACATCTGTGGGCATAAAGGACACGCTTACCGG
ATCATTAATCAAATCACCCGCAGTCCTGATTTTTTTAAATTGTCTCGTTTTTTACTCTCTGGCGAAGGGATGGATCTGGA
TTGGTTAATCGATAAAACCGAAGCCGATATTCCGTTAAACTGGACAGTAGGAGAAATGCACTTACATACCAAACAAGTAC
TTGCTGTTGCTGCTCATGCCACTAATTTTGAAACTAAGTACTTTGACTTATCGACCACAAATTGGAAAGATATTTTACGT
GCCTCTTGCGCGATTCCTGCGTTGCATAAACAACCGGTGATCATGGATAAAATGGAATGGGTTGACGGAGGATTAACGAC
GCCGATTCCTGTACAAGAAGCCTATGATAGAGGTTATCGTCACATTGTTGTTATCCGTACTGTTCCGGTTGAATTTAAAG
AAAACCACGACTGGATGATGAAAGTCGCCAAGATGACTAAAAATGCCAAATTAAATCAAATGGCCGTGATGTTGATGAAT
CACGAAGAAAGCTACCGTAAAACGCAGGTATTTTTAGCTAATCCGCCGGATGATGTCACTATTTATGAGATTTCACCGAA
TAAGAACCTTGAATCTAAATTACTGGGAAGCACTAAAGAGCAATTAGATAACGATTATCAACACGGTAAAGATGTGGGGA
AATTATTTCTAGAGGTGATTGCGCCTAAATTGAATTTAGAGCAAGCACCGCAACCGCATATTCTTGTAAAAACACACGAA
GATCGATTGAAAGAAGAGAACAGAAAACAAGATTATGAAGATCCGATTGATAAGATTTGGAGCAACAAAACGCACGGTGA
AGTGCTCGGTGTTGATCGAATTGCCTTGAAGTGGATTAACATTAACGTTGGTGAAAAGAAACAGACGTTAGTGATCGTTA
ATGGTCGTAATGAAAGTTATTGGAAATACAAAGAAGCCATTCTTGAGTTAAGTCAGTATTTTAATATTTATACGTATGAT
CACCGTGGACAAGGTGAGTCAGGACGGATAACGCAAGATCACGAATTAGGCCATGTGGATGACTTTCATGATTATGTGAT
GGATCTGTATATCTTTATGGAAAAGGTTGTCAGACCAAATTTAGAAGGAGAGTGCTTTATGCTTTCTCATTCGATGGGGG
GAGCGGTGACCGCCCAATACCTTTCAAAATTTGATCATCCCGTAACGGCATCAGCGGCAACGTCACCAATGTTTGGTGTG
TATATACCAGGCAAAGCGTATGGACTAAAAACTCAAACACTAAACTTACTTGATGTGTTGGCGAGTAAGCCTAACTATGC
ATTAGGGCAAAGTCATTTTAAGAAAGTTGAGTATGACGATAACGTATTAACTCACAGTAAAATAAGATATCAAATGTTTG
TTGAGCTGTTTGAAAATATGCCGAATTTACGGTTAGGAGGCCCAAGTACTCATTGGATCACTGAATCTATAAAAGCAGGA
AAAAAATGCATCGCTGAAGCTCATAAAATAAAAATTCCAATGCTGATTTTACAAGCAGGAGACGATCTTGTTGTGAGTAA
TGTGGCTCAGCGAAGTTTTCATGAGAACAGTCATCTTTGTCATTTAGAAACAATCCCAGATTCGTATCATGATATGTTGA
TAGAAGACGATAAACATCGAGATATTGTATTAAGAAAATTGATTAATTTCTTTAGTAGTGATTATAAGTTTTATTAA

Upstream 100 bases:

>100_bases
AAAATCATTATTTATCGTGCTTCTATTTACCGCCCACGCTTTATAGCGATATGCCATAATAGAACAAAGACAATTACGTT
ATCGAGAATGGGCAAAACGA

Downstream 100 bases:

>100_bases
ATACGATTAGAACATAGTATGAAAAAAGCCCTGTTTGAGACTCATCAAACAGGGCTTTTTTTATTTACGTAAAGTGGTTA
AAACTTATGTAAGCGTGCGG

Product: phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 637

Protein sequence:

>638_residues
MGEHYSISKQNYDVFRVPKTKVDKIALVTEGGGQRGIFTAGVLDTFLEAKFNPFALLIGTSAGSLNLASYICGHKGHAYR
IINQITRSPDFFKLSRFLLSGEGMDLDWLIDKTEADIPLNWTVGEMHLHTKQVLAVAAHATNFETKYFDLSTTNWKDILR
ASCAIPALHKQPVIMDKMEWVDGGLTTPIPVQEAYDRGYRHIVVIRTVPVEFKENHDWMMKVAKMTKNAKLNQMAVMLMN
HEESYRKTQVFLANPPDDVTIYEISPNKNLESKLLGSTKEQLDNDYQHGKDVGKLFLEVIAPKLNLEQAPQPHILVKTHE
DRLKEENRKQDYEDPIDKIWSNKTHGEVLGVDRIALKWININVGEKKQTLVIVNGRNESYWKYKEAILELSQYFNIYTYD
HRGQGESGRITQDHELGHVDDFHDYVMDLYIFMEKVVRPNLEGECFMLSHSMGGAVTAQYLSKFDHPVTASAATSPMFGV
YIPGKAYGLKTQTLNLLDVLASKPNYALGQSHFKKVEYDDNVLTHSKIRYQMFVELFENMPNLRLGGPSTHWITESIKAG
KKCIAEAHKIKIPMLILQAGDDLVVSNVAQRSFHENSHLCHLETIPDSYHDMLIEDDKHRDIVLRKLINFFSSDYKFY

Sequences:

>Translated_638_residues
MGEHYSISKQNYDVFRVPKTKVDKIALVTEGGGQRGIFTAGVLDTFLEAKFNPFALLIGTSAGSLNLASYICGHKGHAYR
IINQITRSPDFFKLSRFLLSGEGMDLDWLIDKTEADIPLNWTVGEMHLHTKQVLAVAAHATNFETKYFDLSTTNWKDILR
ASCAIPALHKQPVIMDKMEWVDGGLTTPIPVQEAYDRGYRHIVVIRTVPVEFKENHDWMMKVAKMTKNAKLNQMAVMLMN
HEESYRKTQVFLANPPDDVTIYEISPNKNLESKLLGSTKEQLDNDYQHGKDVGKLFLEVIAPKLNLEQAPQPHILVKTHE
DRLKEENRKQDYEDPIDKIWSNKTHGEVLGVDRIALKWININVGEKKQTLVIVNGRNESYWKYKEAILELSQYFNIYTYD
HRGQGESGRITQDHELGHVDDFHDYVMDLYIFMEKVVRPNLEGECFMLSHSMGGAVTAQYLSKFDHPVTASAATSPMFGV
YIPGKAYGLKTQTLNLLDVLASKPNYALGQSHFKKVEYDDNVLTHSKIRYQMFVELFENMPNLRLGGPSTHWITESIKAG
KKCIAEAHKIKIPMLILQAGDDLVVSNVAQRSFHENSHLCHLETIPDSYHDMLIEDDKHRDIVLRKLINFFSSDYKFY
>Mature_637_residues
GEHYSISKQNYDVFRVPKTKVDKIALVTEGGGQRGIFTAGVLDTFLEAKFNPFALLIGTSAGSLNLASYICGHKGHAYRI
INQITRSPDFFKLSRFLLSGEGMDLDWLIDKTEADIPLNWTVGEMHLHTKQVLAVAAHATNFETKYFDLSTTNWKDILRA
SCAIPALHKQPVIMDKMEWVDGGLTTPIPVQEAYDRGYRHIVVIRTVPVEFKENHDWMMKVAKMTKNAKLNQMAVMLMNH
EESYRKTQVFLANPPDDVTIYEISPNKNLESKLLGSTKEQLDNDYQHGKDVGKLFLEVIAPKLNLEQAPQPHILVKTHED
RLKEENRKQDYEDPIDKIWSNKTHGEVLGVDRIALKWININVGEKKQTLVIVNGRNESYWKYKEAILELSQYFNIYTYDH
RGQGESGRITQDHELGHVDDFHDYVMDLYIFMEKVVRPNLEGECFMLSHSMGGAVTAQYLSKFDHPVTASAATSPMFGVY
IPGKAYGLKTQTLNLLDVLASKPNYALGQSHFKKVEYDDNVLTHSKIRYQMFVELFENMPNLRLGGPSTHWITESIKAGK
KCIAEAHKIKIPMLILQAGDDLVVSNVAQRSFHENSHLCHLETIPDSYHDMLIEDDKHRDIVLRKLINFFSSDYKFY

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=311, Percent_Identity=38.2636655948553, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI48994980, Length=313, Percent_Identity=34.5047923322684, Blast_Score=194, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 72943; Mature: 72812

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEHYSISKQNYDVFRVPKTKVDKIALVTEGGGQRGIFTAGVLDTFLEAKFNPFALLIGT
CCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGSLNLASYICGHKGHAYRIINQITRSPDFFKLSRFLLSGEGMDLDWLIDKTEADIPLN
CCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEE
WTVGEMHLHTKQVLAVAAHATNFETKYFDLSTTNWKDILRASCAIPALHKQPVIMDKMEW
EEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
VDGGLTTPIPVQEAYDRGYRHIVVIRTVPVEFKENHDWMMKVAKMTKNAKLNQMAVMLMN
HCCCCCCCCCHHHHHHCCCEEEEEEEEECEEECCCCHHHHHHHHHHCCCCHHHEEEEEEC
HEESYRKTQVFLANPPDDVTIYEISPNKNLESKLLGSTKEQLDNDYQHGKDVGKLFLEVI
CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHH
APKLNLEQAPQPHILVKTHEDRLKEENRKQDYEDPIDKIWSNKTHGEVLGVDRIALKWIN
CCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCEEEEEEEE
INVGEKKQTLVIVNGRNESYWKYKEAILELSQYFNIYTYDHRGQGESGRITQDHELGHVD
ECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCH
DFHDYVMDLYIFMEKVVRPNLEGECFMLSHSMGGAVTAQYLSKFDHPVTASAATSPMFGV
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE
YIPGKAYGLKTQTLNLLDVLASKPNYALGQSHFKKVEYDDNVLTHSKIRYQMFVELFENM
EECCCEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCC
PNLRLGGPSTHWITESIKAGKKCIAEAHKIKIPMLILQAGDDLVVSNVAQRSFHENSHLC
CCCEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCCEE
HLETIPDSYHDMLIEDDKHRDIVLRKLINFFSSDYKFY
EEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GEHYSISKQNYDVFRVPKTKVDKIALVTEGGGQRGIFTAGVLDTFLEAKFNPFALLIGT
CCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEEEC
SAGSLNLASYICGHKGHAYRIINQITRSPDFFKLSRFLLSGEGMDLDWLIDKTEADIPLN
CCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEE
WTVGEMHLHTKQVLAVAAHATNFETKYFDLSTTNWKDILRASCAIPALHKQPVIMDKMEW
EEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
VDGGLTTPIPVQEAYDRGYRHIVVIRTVPVEFKENHDWMMKVAKMTKNAKLNQMAVMLMN
HCCCCCCCCCHHHHHHCCCEEEEEEEEECEEECCCCHHHHHHHHHHCCCCHHHEEEEEEC
HEESYRKTQVFLANPPDDVTIYEISPNKNLESKLLGSTKEQLDNDYQHGKDVGKLFLEVI
CCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHH
APKLNLEQAPQPHILVKTHEDRLKEENRKQDYEDPIDKIWSNKTHGEVLGVDRIALKWIN
CCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCEEEEEEEE
INVGEKKQTLVIVNGRNESYWKYKEAILELSQYFNIYTYDHRGQGESGRITQDHELGHVD
ECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCH
DFHDYVMDLYIFMEKVVRPNLEGECFMLSHSMGGAVTAQYLSKFDHPVTASAATSPMFGV
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE
YIPGKAYGLKTQTLNLLDVLASKPNYALGQSHFKKVEYDDNVLTHSKIRYQMFVELFENM
EECCCEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCC
PNLRLGGPSTHWITESIKAGKKCIAEAHKIKIPMLILQAGDDLVVSNVAQRSFHENSHLC
CCCEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHCCCCCEE
HLETIPDSYHDMLIEDDKHRDIVLRKLINFFSSDYKFY
EEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]