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The map label for this gene is hcp [H]

Identifier: 209694748

GI number: 209694748

Start: 1311319

End: 1311840

Strand: Direct

Name: hcp [H]

Synonym: VSAL_I1202

Alternate gene names: 209694748

Gene position: 1311319-1311840 (Clockwise)

Preceding gene: 209694747

Following gene: 209694750

Centisome position: 39.44

GC content: 43.3

Gene sequence:

>522_bases
ATGCCAACTCCAGCGTATATGTCAATAAAAGGCGAAGTTCAGGGTGACATCACTAAAGATGCGTATTCAGCAGATTCAAT
AGGGAATACGTGGCAAGAAGCACACATTGATGAGTTTCTTGTTCAAGAACTTGATCATGTATTAACGGTTCCACGTGATC
CTCAAAGTGGCCAGCCAACAGGTCAACGAGTTCACCGTCCTGTGATTGTAACTAAACAACAAGACCGCTGTTCTCCATTG
TTGTTTAACTCATTAGTTTCAGGTGAAAAATTACCAGAGTGCAGTATCAACTTCTACCGTACGTCTATTTCTGGTAAGCA
AGAGCACTATTACACAATCAAATTGATTGATGCACTGCTTGTAGATATGCAAACTCGCATGGCTCATTGTCAAGATGCTG
CAACGTCAGATCGTGTAACAGAAGAAGTGCTTAAGTTTACTTACCGTGCAATTGAAGTGACTCACGAAACGTGTGGCACG
GCAGGTAATGATGATTGGCGCGCACCACGCGAAGCGGGTTAA

Upstream 100 bases:

>100_bases
CTGATTTTGTTGGCTATTATTTTTGGCATCTATCTTGCCTTATTACATTCATATCGTGATTAACACGACTCTAATCGAAT
TTAAAATAAGGAATAAATAG

Downstream 100 bases:

>100_bases
TCTTAAGAACTAAGACCGATTTTTATTGTTTTTGTAGACTCTTTAATTAGAAAAAGTCTTAAGAAGAGAGTGGAAAGAAC
GACTGAAATGATAAGCCATA

Product: secreted protein Hcp-1 (haemolysin co-regulated protein)

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPTPAYMSIKGEVQGDITKDAYSADSIGNTWQEAHIDEFLVQELDHVLTVPRDPQSGQPTGQRVHRPVIVTKQQDRCSPL
LFNSLVSGEKLPECSINFYRTSISGKQEHYYTIKLIDALLVDMQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGT
AGNDDWRAPREAG

Sequences:

>Translated_173_residues
MPTPAYMSIKGEVQGDITKDAYSADSIGNTWQEAHIDEFLVQELDHVLTVPRDPQSGQPTGQRVHRPVIVTKQQDRCSPL
LFNSLVSGEKLPECSINFYRTSISGKQEHYYTIKLIDALLVDMQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGT
AGNDDWRAPREAG
>Mature_172_residues
PTPAYMSIKGEVQGDITKDAYSADSIGNTWQEAHIDEFLVQELDHVLTVPRDPQSGQPTGQRVHRPVIVTKQQDRCSPLL
FNSLVSGEKLPECSINFYRTSISGKQEHYYTIKLIDALLVDMQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGTA
GNDDWRAPREAG

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 19427; Mature: 19296

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPAYMSIKGEVQGDITKDAYSADSIGNTWQEAHIDEFLVQELDHVLTVPRDPQSGQPT
CCCCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GQRVHRPVIVTKQQDRCSPLLFNSLVSGEKLPECSINFYRTSISGKQEHYYTIKLIDALL
CHHHCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
VDMQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGTAGNDDWRAPREAG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTPAYMSIKGEVQGDITKDAYSADSIGNTWQEAHIDEFLVQELDHVLTVPRDPQSGQPT
CCCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GQRVHRPVIVTKQQDRCSPLLFNSLVSGEKLPECSINFYRTSISGKQEHYYTIKLIDALL
CHHHCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
VDMQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGTAGNDDWRAPREAG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]