| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yqjG [H]
Identifier: 209694747
GI number: 209694747
Start: 1310164
End: 1311135
Strand: Direct
Name: yqjG [H]
Synonym: VSAL_I1201
Alternate gene names: 209694747
Gene position: 1310164-1311135 (Clockwise)
Preceding gene: 209694746
Following gene: 209694748
Centisome position: 39.4
GC content: 43.11
Gene sequence:
>972_bases ATGGGACTTTTAGTTGACGGAAAATGGCACACGGATTGGTACGACACGGCATCAACGGGCGGTAAATTTGAGCGTAAAGC GTCCAGTTTTCGCCATTGGATAACAAAAGACGGCAGGGCTGGCCCATCTGGAGTGTCAGGTTTTAATGCTGAATCTGGGC GTTATCATTTATATGTTTCGCTGGCTTGTCCTTGGGCACACCGCACAGTGATTTACCGTAAGCTAAAAGGGCTTGAAGAC ATGATTTCGATGTCTGTGGTGAATGCGTTTATGGGAGACGACGGTTGGACATTTGAACCGGGTGAAGGCGTTATTGAAGA TACGGTAAATCATGCAACTTATGCGCATGAAATTTACACGAAGGCTGCTCCTGACTATACGGGAAGAGTCACGGTTCCTA TTTTATGGGATAAGAAAACCAATACGATCGTGAGTAATGAATCGGCAGAGATCATTCGTATGTTTAATTCTGCTTTTGAT GATATTGGTGCCACTGAATTGGATTTTTCTCCTGAGCACTTATTAAATGACATCGATGAGTTGAATGCATTTATATACCC AACGATTAATAATGGGGTGTATCGAGCGGGTTTTGCTACGACTCAGGCAGCGTATGATGATGCGGTTGCCGAAGTATTTG GAGCATTAGAGACGGTAGAACAACGCTTATCGACTCAACGTTACTTAATTGGTGATGAGATCACAGAGGCGGATTGGCGT TTGTTTACGACATTGATTCGCTTTGATGCCGTTTATGTTGGGCATTTTAAATGTAACCTAAAACGCATTGTTGACTACCC GAATATTTGGGGCTATTTACGTGATTTATTTCAACAACCCGGAGTGAGTGAAACGGTTAATATTGACTACATAAAAGCGC ATTATTACGGCAGTCATGAAACGATTAACCCAACACTTATTATACCTAAAGGGCCAGCGTTGGATTTCTTTAGCCAACAC CACCGTGACTAG
Upstream 100 bases:
>100_bases AAGCGTTTGATGATTATAGCCAAGGTCGTTTTAACTAACAAACTGACGTCTTTAGTAATTAATACACATTTTTATCTTTA ATGAATAGCGAGGAAACAGC
Downstream 100 bases:
>100_bases GTTTATTTATGTTCAACTTATTGTGAAATGATCCAATTTATTGTTTTTATTTTGTGATTGTAAATTAGTGTTTTTTTAAT TTACTGATTTTGTTGGCTAT
Product: IMP dehydrogenase/GMP reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MGLLVDGKWHTDWYDTASTGGKFERKASSFRHWITKDGRAGPSGVSGFNAESGRYHLYVSLACPWAHRTVIYRKLKGLED MISMSVVNAFMGDDGWTFEPGEGVIEDTVNHATYAHEIYTKAAPDYTGRVTVPILWDKKTNTIVSNESAEIIRMFNSAFD DIGATELDFSPEHLLNDIDELNAFIYPTINNGVYRAGFATTQAAYDDAVAEVFGALETVEQRLSTQRYLIGDEITEADWR LFTTLIRFDAVYVGHFKCNLKRIVDYPNIWGYLRDLFQQPGVSETVNIDYIKAHYYGSHETINPTLIIPKGPALDFFSQH HRD
Sequences:
>Translated_323_residues MGLLVDGKWHTDWYDTASTGGKFERKASSFRHWITKDGRAGPSGVSGFNAESGRYHLYVSLACPWAHRTVIYRKLKGLED MISMSVVNAFMGDDGWTFEPGEGVIEDTVNHATYAHEIYTKAAPDYTGRVTVPILWDKKTNTIVSNESAEIIRMFNSAFD DIGATELDFSPEHLLNDIDELNAFIYPTINNGVYRAGFATTQAAYDDAVAEVFGALETVEQRLSTQRYLIGDEITEADWR LFTTLIRFDAVYVGHFKCNLKRIVDYPNIWGYLRDLFQQPGVSETVNIDYIKAHYYGSHETINPTLIIPKGPALDFFSQH HRD >Mature_322_residues GLLVDGKWHTDWYDTASTGGKFERKASSFRHWITKDGRAGPSGVSGFNAESGRYHLYVSLACPWAHRTVIYRKLKGLEDM ISMSVVNAFMGDDGWTFEPGEGVIEDTVNHATYAHEIYTKAAPDYTGRVTVPILWDKKTNTIVSNESAEIIRMFNSAFDD IGATELDFSPEHLLNDIDELNAFIYPTINNGVYRAGFATTQAAYDDAVAEVFGALETVEQRLSTQRYLIGDEITEADWRL FTTLIRFDAVYVGHFKCNLKRIVDYPNIWGYLRDLFQQPGVSETVNIDYIKAHYYGSHETINPTLIIPKGPALDFFSQHH RD
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=324, Percent_Identity=61.1111111111111, Blast_Score=396, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6322929, Length=367, Percent_Identity=38.1471389645777, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6323906, Length=364, Percent_Identity=35.4395604395604, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321593, Length=339, Percent_Identity=31.2684365781711, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 36563; Mature: 36432
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLVDGKWHTDWYDTASTGGKFERKASSFRHWITKDGRAGPSGVSGFNAESGRYHLYVS CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE LACPWAHRTVIYRKLKGLEDMISMSVVNAFMGDDGWTFEPGEGVIEDTVNHATYAHEIYT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHH KAAPDYTGRVTVPILWDKKTNTIVSNESAEIIRMFNSAFDDIGATELDFSPEHLLNDIDE HCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LNAFIYPTINNGVYRAGFATTQAAYDDAVAEVFGALETVEQRLSTQRYLIGDEITEADWR CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHH LFTTLIRFDAVYVGHFKCNLKRIVDYPNIWGYLRDLFQQPGVSETVNIDYIKAHYYGSHE HHHHHHHHHHEEEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCC TINPTLIIPKGPALDFFSQHHRD CCCCEEEEECCCCHHHHHHHCCC >Mature Secondary Structure GLLVDGKWHTDWYDTASTGGKFERKASSFRHWITKDGRAGPSGVSGFNAESGRYHLYVS CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE LACPWAHRTVIYRKLKGLEDMISMSVVNAFMGDDGWTFEPGEGVIEDTVNHATYAHEIYT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHH KAAPDYTGRVTVPILWDKKTNTIVSNESAEIIRMFNSAFDDIGATELDFSPEHLLNDIDE HCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LNAFIYPTINNGVYRAGFATTQAAYDDAVAEVFGALETVEQRLSTQRYLIGDEITEADWR CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHH LFTTLIRFDAVYVGHFKCNLKRIVDYPNIWGYLRDLFQQPGVSETVNIDYIKAHYYGSHE HHHHHHHHHHEEEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCC TINPTLIIPKGPALDFFSQHHRD CCCCEEEEECCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]