Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 209694746

GI number: 209694746

Start: 1309250

End: 1310101

Strand: Direct

Name: yhhW [C]

Synonym: VSAL_I1200

Alternate gene names: 209694746

Gene position: 1309250-1310101 (Clockwise)

Preceding gene: 209694744

Following gene: 209694747

Centisome position: 39.37

GC content: 43.19

Gene sequence:

>852_bases
ATGACAAATAAAAATAGAGCGCTAAAAAATGTGTTTCCAGGGATAGCGACTTCTGATGGTGATGGCGTGAAATTAACGCG
AATTATTGGTACGCAACAGTTGAATGTTTTAGATCCATTTTTGCTTTTAGATTGTTTTGAAAGTGATGACGCATCGGATT
ATATCGGTGGTTTTCCAACCCACCCGCACCGCGGTTTTGAGACCGTGACTTACCTGTTAAATGGGAAAATGCGTCATAAA
GATAATGCAGGGCATGAAGGGGTTGTTGAGCCCGGAGGTGTTCAATGGATGAGCGCAGGCAAAGGTGTATTGCATTCTGA
AATGCCAGAACAAGAAGAAGGGTTATTGAAAGGTTTTCAATTATGGGTGAATTTGCCTAAGGCTTCAAAAATGATGGCGC
CGGCATATCAAGAGTACCCACCAGAATCAACACCAGTAGAGTTAAGAGAGAACGGGACTGAGGTTCGAGTAATTTCCGGT
ACAACTAATGAAGGCACGACTGGACCAGTAAAGAATACGCACATTACACCGACATATATGGACGTGAAATTGCCAGAAGG
AATGACTTTTGAACAAGCCTTACCTATTGGGCACAACGCGTTTATCTACGTAATTGAAGGGGCGGTGACCATGGCGAATG
ACAGTACCCAGAAGATAACAAAGAAATCTCTTGGTGTGTTTGATGAAGGAGAACAAGTTTCGGTGATGGCGTCTGATTCT
GAGACTCGATTCTTATTGATTGCAGGGCGACCATTGAACGAACCGATTGCGCGTGGTGGTCCGTTTGTAATGAATACCAG
AGAAGAAGTATTGCAAGCGTTTGATGATTATAGCCAAGGTCGTTTTAACTAA

Upstream 100 bases:

>100_bases
CTCAGTATTGCTGTTTATCTACTTTTGTTCAACGACTATTCTTTACACCAAGCGATAGGCATAAGCCTAAAGATAAAAGA
ATTAAGCGGGAAAATAGAGT

Downstream 100 bases:

>100_bases
CAAACTGACGTCTTTAGTAATTAATACACATTTTTATCTTTAATGAATAGCGAGGAAACAGCATGGGACTTTTAGTTGAC
GGAAAATGGCACACGGATTG

Product: pirin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTNKNRALKNVFPGIATSDGDGVKLTRIIGTQQLNVLDPFLLLDCFESDDASDYIGGFPTHPHRGFETVTYLLNGKMRHK
DNAGHEGVVEPGGVQWMSAGKGVLHSEMPEQEEGLLKGFQLWVNLPKASKMMAPAYQEYPPESTPVELRENGTEVRVISG
TTNEGTTGPVKNTHITPTYMDVKLPEGMTFEQALPIGHNAFIYVIEGAVTMANDSTQKITKKSLGVFDEGEQVSVMASDS
ETRFLLIAGRPLNEPIARGGPFVMNTREEVLQAFDDYSQGRFN

Sequences:

>Translated_283_residues
MTNKNRALKNVFPGIATSDGDGVKLTRIIGTQQLNVLDPFLLLDCFESDDASDYIGGFPTHPHRGFETVTYLLNGKMRHK
DNAGHEGVVEPGGVQWMSAGKGVLHSEMPEQEEGLLKGFQLWVNLPKASKMMAPAYQEYPPESTPVELRENGTEVRVISG
TTNEGTTGPVKNTHITPTYMDVKLPEGMTFEQALPIGHNAFIYVIEGAVTMANDSTQKITKKSLGVFDEGEQVSVMASDS
ETRFLLIAGRPLNEPIARGGPFVMNTREEVLQAFDDYSQGRFN
>Mature_282_residues
TNKNRALKNVFPGIATSDGDGVKLTRIIGTQQLNVLDPFLLLDCFESDDASDYIGGFPTHPHRGFETVTYLLNGKMRHKD
NAGHEGVVEPGGVQWMSAGKGVLHSEMPEQEEGLLKGFQLWVNLPKASKMMAPAYQEYPPESTPVELRENGTEVRVISGT
TNEGTTGPVKNTHITPTYMDVKLPEGMTFEQALPIGHNAFIYVIEGAVTMANDSTQKITKKSLGVFDEGEQVSVMASDSE
TRFLLIAGRPLNEPIARGGPFVMNTREEVLQAFDDYSQGRFN

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=268, Percent_Identity=46.2686567164179, Blast_Score=208, Evalue=4e-54,
Organism=Homo sapiens, GI4505823, Length=268, Percent_Identity=46.2686567164179, Blast_Score=208, Evalue=4e-54,
Organism=Escherichia coli, GI1789847, Length=200, Percent_Identity=27.5, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 31079; Mature: 30948

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKNRALKNVFPGIATSDGDGVKLTRIIGTQQLNVLDPFLLLDCFESDDASDYIGGFPT
CCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHCHHHEEEECCCCCCCHHCCCCCC
HPHRGFETVTYLLNGKMRHKDNAGHEGVVEPGGVQWMSAGKGVLHSEMPEQEEGLLKGFQ
CCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCHHHHHHHHHH
LWVNLPKASKMMAPAYQEYPPESTPVELRENGTEVRVISGTTNEGTTGPVKNTHITPTYM
HEEECCCHHHHHCCHHHHCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEE
DVKLPEGMTFEQALPIGHNAFIYVIEGAVTMANDSTQKITKKSLGVFDEGEQVSVMASDS
EEECCCCCCHHHCCCCCCCEEEEEEECEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCC
ETRFLLIAGRPLNEPIARGGPFVMNTREEVLQAFDDYSQGRFN
CEEEEEEECCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TNKNRALKNVFPGIATSDGDGVKLTRIIGTQQLNVLDPFLLLDCFESDDASDYIGGFPT
CCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHCHHHEEEECCCCCCCHHCCCCCC
HPHRGFETVTYLLNGKMRHKDNAGHEGVVEPGGVQWMSAGKGVLHSEMPEQEEGLLKGFQ
CCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCHHHHHHHHHH
LWVNLPKASKMMAPAYQEYPPESTPVELRENGTEVRVISGTTNEGTTGPVKNTHITPTYM
HEEECCCHHHHHCCHHHHCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEE
DVKLPEGMTFEQALPIGHNAFIYVIEGAVTMANDSTQKITKKSLGVFDEGEQVSVMASDS
EEECCCCCCHHHCCCCCCCEEEEEEECEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCC
ETRFLLIAGRPLNEPIARGGPFVMNTREEVLQAFDDYSQGRFN
CEEEEEEECCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]