Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694592

Identifier: 209694592

GI number: 209694592

Start: 1127935

End: 1128399

Strand: Direct

Name: 209694592

Synonym: VSAL_I1031

Alternate gene names: NA

Gene position: 1127935-1128399 (Clockwise)

Preceding gene: 209694591

Following gene: 209694593

Centisome position: 33.92

GC content: 41.72

Gene sequence:

>465_bases
ATGTTTAGTGGTTCATCAGGCGCAGACTATCAAGACACCGTGATCGAGAATGATGGCTTTTGGCCTAACTTGAATGCCGG
TGATTTTGAAAAGCGTCGAAGCATTCCAACTGACATGGATTCAGAAACGGTTGCATATGCTTTAGCAGCAGCAATAGCCC
AAATAAACATTGCCTTAATTAATAAGAAAACGGCTTACGAAGCGGAAGGCATTACATCAGCAAGTGATGTTCCAGGGCAG
CCAATGATAGATAACAAAAACTTATTGGTGATCTTGTATGAGAAATCGGTATTTGCCAGAGCTAAAGCAGATTTAATCCC
TGAGTTCGCCATGGTGCAAACCAAAGATGCCGGTGATCGAGTTGCAGAGAATGAAACCTTAATTACGGAACGTTTATTAG
CAGAAAGCCAACAACATATTAGAGCTATTTTTGGTAAGAGCCGAGTAGGGGTTGAATTGCTATGA

Upstream 100 bases:

>100_bases
TTTTTTGGGCATTGGTTTTCTGCGTTGATGGCTTTGATTTATGTTCTTGGAATTTCTTATTTACATTCTCAACTAAGAAA
AATCCATAAGGAAGAATCAA

Downstream 100 bases:

>100_bases
GTGAGATTCAAAGTCAGCCACAAGCAGGCTTTATGCTGCAAGGGCTTAATCAGCACCTAAGTAATACAACACCAGAGCGC
TTGCATAAACACTTTGAATG

Product: head completion/stabilization protein

Products: NA

Alternate protein names: Head Completion Protein; Head Completion/Stabilization Protein; Head Completion/Stabilization Protein Bacteriophage Origin; Prophage; Phage Gene; Phage Head Completion

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFSGSSGADYQDTVIENDGFWPNLNAGDFEKRRSIPTDMDSETVAYALAAAIAQINIALINKKTAYEAEGITSASDVPGQ
PMIDNKNLLVILYEKSVFARAKADLIPEFAMVQTKDAGDRVAENETLITERLLAESQQHIRAIFGKSRVGVELL

Sequences:

>Translated_154_residues
MFSGSSGADYQDTVIENDGFWPNLNAGDFEKRRSIPTDMDSETVAYALAAAIAQINIALINKKTAYEAEGITSASDVPGQ
PMIDNKNLLVILYEKSVFARAKADLIPEFAMVQTKDAGDRVAENETLITERLLAESQQHIRAIFGKSRVGVELL
>Mature_154_residues
MFSGSSGADYQDTVIENDGFWPNLNAGDFEKRRSIPTDMDSETVAYALAAAIAQINIALINKKTAYEAEGITSASDVPGQ
PMIDNKNLLVILYEKSVFARAKADLIPEFAMVQTKDAGDRVAENETLITERLLAESQQHIRAIFGKSRVGVELL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16839; Mature: 16839

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGSSGADYQDTVIENDGFWPNLNAGDFEKRRSIPTDMDSETVAYALAAAIAQINIALI
CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEE
NKKTAYEAEGITSASDVPGQPMIDNKNLLVILYEKSVFARAKADLIPEFAMVQTKDAGDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCCCCH
VAENETLITERLLAESQQHIRAIFGKSRVGVELL
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC
>Mature Secondary Structure
MFSGSSGADYQDTVIENDGFWPNLNAGDFEKRRSIPTDMDSETVAYALAAAIAQINIALI
CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEE
NKKTAYEAEGITSASDVPGQPMIDNKNLLVILYEKSVFARAKADLIPEFAMVQTKDAGDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCCCCH
VAENETLITERLLAESQQHIRAIFGKSRVGVELL
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA