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The map label for this gene is ybeB [H]

Identifier: 209694550

GI number: 209694550

Start: 1090368

End: 1090685

Strand: Reverse

Name: ybeB [H]

Synonym: VSAL_I0987

Alternate gene names: 209694550

Gene position: 1090685-1090368 (Counterclockwise)

Preceding gene: 209694551

Following gene: 209694549

Centisome position: 32.8

GC content: 39.94

Gene sequence:

>318_bases
TTGCAAGATAAAGAACTGCACGACTTTCTATTCAATCATGTTGATGACATGAAAGCTGAAAATATTACAACAGTTGATGT
ACGTGATAAATCAAGCATTACAGACTTTATGATTGTATGTACGGGTACATCAAAACGCCACGTCAGCTCAATTGCTTCAA
ATGTATCGGACAAAGCAAGAGAAGCTGGGCTGATCCCTTATGGTGTTGATGGAGAAGCCGAAGGTGAATGGGTTGTTGTC
GATATGGGTGATGTAATGATCCATATTTTACAAGCTGAGCACCGTGAGCTATACCAACTTGAAAAACTGTGGAGCTAA

Upstream 100 bases:

>100_bases
AGATATCTGTAATATTCACATTTCAGTGACACCTCCACCATCTCATTCATAGACGTTCACTGATATACTTCCTTATAAAT
AATCGATCCTAGGTGATACT

Downstream 100 bases:

>100_bases
TCCATGAAACTTCAATTAATTGCTGTTGGCACTAAAATGCCTAAATGGGTAGAAGAAGGTTATAAAGAATATAGCCGTCG
CTTCCCAAAAGACATGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQDKELHDFLFNHVDDMKAENITTVDVRDKSSITDFMIVCTGTSKRHVSSIASNVSDKAREAGLIPYGVDGEAEGEWVVV
DMGDVMIHILQAEHRELYQLEKLWS

Sequences:

>Translated_105_residues
MQDKELHDFLFNHVDDMKAENITTVDVRDKSSITDFMIVCTGTSKRHVSSIASNVSDKAREAGLIPYGVDGEAEGEWVVV
DMGDVMIHILQAEHRELYQLEKLWS
>Mature_105_residues
MQDKELHDFLFNHVDDMKAENITTVDVRDKSSITDFMIVCTGTSKRHVSSIASNVSDKAREAGLIPYGVDGEAEGEWVVV
DMGDVMIHILQAEHRELYQLEKLWS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=105, Percent_Identity=57.1428571428571, Blast_Score=136, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 11895; Mature: 11895

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKELHDFLFNHVDDMKAENITTVDVRDKSSITDFMIVCTGTSKRHVSSIASNVSDKAR
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
EAGLIPYGVDGEAEGEWVVVDMGDVMIHILQAEHRELYQLEKLWS
HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQDKELHDFLFNHVDDMKAENITTVDVRDKSSITDFMIVCTGTSKRHVSSIASNVSDKAR
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
EAGLIPYGVDGEAEGEWVVVDMGDVMIHILQAEHRELYQLEKLWS
HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]