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The map label for this gene is ybeD [C]

Identifier: 209694544

GI number: 209694544

Start: 1084196

End: 1084465

Strand: Reverse

Name: ybeD [C]

Synonym: VSAL_I0981

Alternate gene names: 209694544

Gene position: 1084465-1084196 (Counterclockwise)

Preceding gene: 209694545

Following gene: 209694543

Centisome position: 32.61

GC content: 40.0

Gene sequence:

>270_bases
ATGCAAGAGCAACCAAAGCTAAAAGATCTTCTTGAATTCCCATGTAAATTTACCTATAAAGCCGTTGGCCTTGCTCATGA
AGACCTTCCTGTCCTTGTACTTGAAGTTATTCAACGTCATGCTCCAGGTGATTACACGCCACACGTAAAAGCAAGCGGCA
AAGGTAACTACAACTCTGTATCTGTAAGTATTACGGCGACATCGATTGAACAAGTAGAAATACTGTATAAAGAACTTGCT
GACATCGAAATGGTTCGTATGGTTCTTTAA

Upstream 100 bases:

>100_bases
TTTAGTGATGTAAACTCGATGACTTATAACTCTTGTTATCTGACTTAGGTCACAGTAAAATTGCTTTCTAATATTTATCC
ACTCTCGATTGGAGACGGTT

Downstream 100 bases:

>100_bases
TATATTTGGTAGGTAATAAGCGTACTATTTAGTAGAAAATATTACCTGCCATTTTTAAATTTTGATATACCCCTACATTT
CTTATCTATTCCTTCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MQEQPKLKDLLEFPCKFTYKAVGLAHEDLPVLVLEVIQRHAPGDYTPHVKASGKGNYNSVSVSITATSIEQVEILYKELA
DIEMVRMVL

Sequences:

>Translated_89_residues
MQEQPKLKDLLEFPCKFTYKAVGLAHEDLPVLVLEVIQRHAPGDYTPHVKASGKGNYNSVSVSITATSIEQVEILYKELA
DIEMVRMVL
>Mature_89_residues
MQEQPKLKDLLEFPCKFTYKAVGLAHEDLPVLVLEVIQRHAPGDYTPHVKASGKGNYNSVSVSITATSIEQVEILYKELA
DIEMVRMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=84, Percent_Identity=65.4761904761905, Blast_Score=111, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 9986; Mature: 9986

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEQPKLKDLLEFPCKFTYKAVGLAHEDLPVLVLEVIQRHAPGDYTPHVKASGKGNYNSV
CCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCEE
SVSITATSIEQVEILYKELADIEMVRMVL
EEEEEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQEQPKLKDLLEFPCKFTYKAVGLAHEDLPVLVLEVIQRHAPGDYTPHVKASGKGNYNSV
CCCCCHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCEE
SVSITATSIEQVEILYKELADIEMVRMVL
EEEEEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA