| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is proA [H]
Identifier: 209694541
GI number: 209694541
Start: 1081071
End: 1082312
Strand: Direct
Name: proA [H]
Synonym: VSAL_I0978
Alternate gene names: 209694541
Gene position: 1081071-1082312 (Clockwise)
Preceding gene: 209694540
Following gene: 209694554
Centisome position: 32.51
GC content: 41.79
Gene sequence:
>1242_bases ATGGGTCAAGCAGCAAAAAATGCAGCGTTTGACTTAGCGGTAGCTCCAACAGCCCAGAAGAACAAAGCATTGGCGATTAT TGCTGATGAACTTGAAGCGAACAAAGAGGCGATTCTTGCGGCTAATGCAAAAGACATTAGTGCAGCGGTAGAAGCGGGCA TTTCAGAGGCAATGCAAGATCGTTTATTACTAACAGAAGAGCGTTTAGTTGCTATTGCTAATGACGTTCGTAATGTGATC AACTTAAATGATCCTGTTGGTAGTGAAATTGACAGTAAAATGCTTGAAAATGGCATGTCACTTTCTCGCCGCCGTGTACC AATTGGTGTGATTGGTGTGATCTATGAAGCTCGTCCAAATGTAACGATCGATATCGCTTCATTATGTTTAAAAACCGGTA ATGCGAGTATTCTACGTGGTGGTAAAGAGACGTTCTTCTCTAATATGGAGTTAGTTAAGGTCATTCAAGTTGCTCTTGAA AAAGCCGGCTTACCAGCTGCATCAGTACAATACATAGAGAAACCAGATCGTGAACTAGTTTCAGAGCTATTACGTCTGGA TGACTACGTTGATATGATCATTCCACGTGGTGGTGCTGGTTTGCACAAAATGTGTAAAGAAAACAGTTCAATTCCAGTCA TCATTGGCGGGTTTGGTATTAGCCATGCGTTTGTTGATGACAGTGCTGATTTAGAAAGAGCCTTGTTGGTTGTTGATAAC TCAAAAGCACAACGCCCATCTGCATGTAATGCACTTGATACACTGTTAGTTCATGAGGCAGTGGCTCCACAATTCTTAGC ATTATTAGCGAATAAAATGGCAGGTCGTGTTGAATTGGTTGCTGAACCAAAAGCTTATTCGTTACTAAAAGAGTTTAAAA ACGTGTCATTACGTGAAGCACAAGACGGTGATTTTGATACTGAATGGCTAAGTTACACATTAGGTGTGAAAGTGGTGTCT GATGTAAATGAAGCAGCGGCTCATATGCAAACACATAACGCGAGTCATTCTGATACTATTTTAACAAATAATATTGAATC TGCTGAAAAGTTCATTAATACCGCAGGTTCAGCTGCCGTGTATGTGAATGCATCAACACGCTTCACTGATGGGGCTCAGT TTGGTTTAGGCGCTGAAGTTGCGGTATCAACCCAGAAGCTTCATGCTCGTGGTCCAATGGGCTTAGAAGAGCTGACAAGT TACAAATGGGTGGGGAAAGCGGATTATCTTATTCGCCCATAA
Upstream 100 bases:
>100_bases TATTTACGCAGTATTAGGTTATGAATATGGGCCTGTAGCTATCCACCGAGATGATTTAGTACTGATTTAGTAAAGGATAT TTATTGTGAATTTAACAAAA
Downstream 100 bases:
>100_bases TCATATTGATTAATGTTTAGTAAAAACAAAAAAGGTTGACGCTAAAACGTCAACCTTTTTTATTATTCAGACCCTAGACC CTAGACCCTAGACCCTAGAC
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase [H]
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MGQAAKNAAFDLAVAPTAQKNKALAIIADELEANKEAILAANAKDISAAVEAGISEAMQDRLLLTEERLVAIANDVRNVI NLNDPVGSEIDSKMLENGMSLSRRRVPIGVIGVIYEARPNVTIDIASLCLKTGNASILRGGKETFFSNMELVKVIQVALE KAGLPAASVQYIEKPDRELVSELLRLDDYVDMIIPRGGAGLHKMCKENSSIPVIIGGFGISHAFVDDSADLERALLVVDN SKAQRPSACNALDTLLVHEAVAPQFLALLANKMAGRVELVAEPKAYSLLKEFKNVSLREAQDGDFDTEWLSYTLGVKVVS DVNEAAAHMQTHNASHSDTILTNNIESAEKFINTAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTS YKWVGKADYLIRP
Sequences:
>Translated_413_residues MGQAAKNAAFDLAVAPTAQKNKALAIIADELEANKEAILAANAKDISAAVEAGISEAMQDRLLLTEERLVAIANDVRNVI NLNDPVGSEIDSKMLENGMSLSRRRVPIGVIGVIYEARPNVTIDIASLCLKTGNASILRGGKETFFSNMELVKVIQVALE KAGLPAASVQYIEKPDRELVSELLRLDDYVDMIIPRGGAGLHKMCKENSSIPVIIGGFGISHAFVDDSADLERALLVVDN SKAQRPSACNALDTLLVHEAVAPQFLALLANKMAGRVELVAEPKAYSLLKEFKNVSLREAQDGDFDTEWLSYTLGVKVVS DVNEAAAHMQTHNASHSDTILTNNIESAEKFINTAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTS YKWVGKADYLIRP >Mature_412_residues GQAAKNAAFDLAVAPTAQKNKALAIIADELEANKEAILAANAKDISAAVEAGISEAMQDRLLLTEERLVAIANDVRNVIN LNDPVGSEIDSKMLENGMSLSRRRVPIGVIGVIYEARPNVTIDIASLCLKTGNASILRGGKETFFSNMELVKVIQVALEK AGLPAASVQYIEKPDRELVSELLRLDDYVDMIIPRGGAGLHKMCKENSSIPVIIGGFGISHAFVDDSADLERALLVVDNS KAQRPSACNALDTLLVHEAVAPQFLALLANKMAGRVELVAEPKAYSLLKEFKNVSLREAQDGDFDTEWLSYTLGVKVVSD VNEAAAHMQTHNASHSDTILTNNIESAEKFINTAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTSY KWVGKADYLIRP
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate [H]
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=407, Percent_Identity=36.1179361179361, Blast_Score=234, Evalue=8e-62, Organism=Homo sapiens, GI62912457, Length=407, Percent_Identity=36.1179361179361, Blast_Score=234, Evalue=9e-62, Organism=Escherichia coli, GI1786438, Length=412, Percent_Identity=57.5242718446602, Blast_Score=480, Evalue=1e-137, Organism=Caenorhabditis elegans, GI17569967, Length=408, Percent_Identity=35.5392156862745, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17569969, Length=408, Percent_Identity=35.5392156862745, Blast_Score=233, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6324899, Length=426, Percent_Identity=35.6807511737089, Blast_Score=260, Evalue=3e-70, Organism=Drosophila melanogaster, GI21357643, Length=408, Percent_Identity=33.3333333333333, Blast_Score=231, Evalue=5e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.41 [H]
Molecular weight: Translated: 44357; Mature: 44226
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAAKNAAFDLAVAPTAQKNKALAIIADELEANKEAILAANAKDISAAVEAGISEAMQD CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH RLLLTEERLVAIANDVRNVINLNDPVGSEIDSKMLENGMSLSRRRVPIGVIGVIYEARPN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEEEEECCCC VTIDIASLCLKTGNASILRGGKETFFSNMELVKVIQVALEKAGLPAASVQYIEKPDRELV CEEEHHHHHHHCCCHHEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH SELLRLDDYVDMIIPRGGAGLHKMCKENSSIPVIIGGFGISHAFVDDSADLERALLVVDN HHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCEEEECCCCCHHCCCCCCCCCEEEEEEEC SKAQRPSACNALDTLLVHEAVAPQFLALLANKMAGRVELVAEPKAYSLLKEFKNVSLREA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCC QDGDFDTEWLSYTLGVKVVSDVNEAAAHMQTHNASHSDTILTNNIESAEKFINTAGSAAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCEEE YVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTSYKWVGKADYLIRP EEECCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHCCCCCCCCCCEECC >Mature Secondary Structure GQAAKNAAFDLAVAPTAQKNKALAIIADELEANKEAILAANAKDISAAVEAGISEAMQD CCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH RLLLTEERLVAIANDVRNVINLNDPVGSEIDSKMLENGMSLSRRRVPIGVIGVIYEARPN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEEEEECCCC VTIDIASLCLKTGNASILRGGKETFFSNMELVKVIQVALEKAGLPAASVQYIEKPDRELV CEEEHHHHHHHCCCHHEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH SELLRLDDYVDMIIPRGGAGLHKMCKENSSIPVIIGGFGISHAFVDDSADLERALLVVDN HHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCEEEECCCCCHHCCCCCCCCCEEEEEEEC SKAQRPSACNALDTLLVHEAVAPQFLALLANKMAGRVELVAEPKAYSLLKEFKNVSLREA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCC QDGDFDTEWLSYTLGVKVVSDVNEAAAHMQTHNASHSDTILTNNIESAEKFINTAGSAAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCEEE YVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELTSYKWVGKADYLIRP EEECCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA