| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ybeL [H]
Identifier: 209694554
GI number: 209694554
Start: 1095318
End: 1095800
Strand: Direct
Name: ybeL [H]
Synonym: VSAL_I0991
Alternate gene names: 209694554
Gene position: 1095318-1095800 (Clockwise)
Preceding gene: 209694541
Following gene: 209694560
Centisome position: 32.94
GC content: 38.51
Gene sequence:
>483_bases ATGTCTAAGCAAAAAAAGGGTTATAACACCATCTTTGAGCATGTGATGAATGTAATGGAACGAAGCCCAGAAGAATTTCA GCGATGGGCTAAATCATCAGAAGAAGTGGTTGATGCCGCCTCTGATATGACCAAAGATGAAATGTCATTGATTTCAAATT ACGTTAAGCGTGATATGAAAGAGTTTGCTCAAAACTATGAAGAGAGTAAAACAACGTTTCCTGATTCACCGTTCTACCGT CTTATTGCGGATTCTATTTGGCACGGGTTATTAGAAATCACCGATAAAACACAACTTGAATGGCGTGAAGTGTTTGATGA TTTAGAGCATCAAGGAGTCTATCAAGCAGGGGAGGTTGTTGGATTAGGTGTGTTGGTGTGTGAAAAATGTGGCCATAGAG AGCAGTATAATCATGCTCAAATTATTCAATCTTGTACTCATTGTGATAATAACGAATTCACTCGTTTGTCGTTAAAACCG TAG
Upstream 100 bases:
>100_bases CGGCATAGAATAACGAATGGAGCGCTTATACTCAAGCGACCTGATGTCGTTTAACTAACTCTAAGCTATATTAATAATAG TGATTTCGTGGAGGTGACTT
Downstream 100 bases:
>100_bases TGTGAAAATGAGGTTAGTAGATTGAATGACCTGTATTCGTATATTTACGCATACAGGCCAAGCATTCTTTTTATTTTTGT TTACGCCAAGCGATGAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMKEFAQNYEESKTTFPDSPFYR LIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVVGLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP
Sequences:
>Translated_160_residues MSKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMKEFAQNYEESKTTFPDSPFYR LIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVVGLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP >Mature_159_residues SKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMKEFAQNYEESKTTFPDSPFYRL IADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVVGLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=38.75, Blast_Score=124, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 18692; Mature: 18561
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMK CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFAQNYEESKTTFPDSPFYRLIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH GLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCC >Mature Secondary Structure SKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMK CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFAQNYEESKTTFPDSPFYRLIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH GLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]