Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is ybeL [H]

Identifier: 209694554

GI number: 209694554

Start: 1095318

End: 1095800

Strand: Direct

Name: ybeL [H]

Synonym: VSAL_I0991

Alternate gene names: 209694554

Gene position: 1095318-1095800 (Clockwise)

Preceding gene: 209694541

Following gene: 209694560

Centisome position: 32.94

GC content: 38.51

Gene sequence:

>483_bases
ATGTCTAAGCAAAAAAAGGGTTATAACACCATCTTTGAGCATGTGATGAATGTAATGGAACGAAGCCCAGAAGAATTTCA
GCGATGGGCTAAATCATCAGAAGAAGTGGTTGATGCCGCCTCTGATATGACCAAAGATGAAATGTCATTGATTTCAAATT
ACGTTAAGCGTGATATGAAAGAGTTTGCTCAAAACTATGAAGAGAGTAAAACAACGTTTCCTGATTCACCGTTCTACCGT
CTTATTGCGGATTCTATTTGGCACGGGTTATTAGAAATCACCGATAAAACACAACTTGAATGGCGTGAAGTGTTTGATGA
TTTAGAGCATCAAGGAGTCTATCAAGCAGGGGAGGTTGTTGGATTAGGTGTGTTGGTGTGTGAAAAATGTGGCCATAGAG
AGCAGTATAATCATGCTCAAATTATTCAATCTTGTACTCATTGTGATAATAACGAATTCACTCGTTTGTCGTTAAAACCG
TAG

Upstream 100 bases:

>100_bases
CGGCATAGAATAACGAATGGAGCGCTTATACTCAAGCGACCTGATGTCGTTTAACTAACTCTAAGCTATATTAATAATAG
TGATTTCGTGGAGGTGACTT

Downstream 100 bases:

>100_bases
TGTGAAAATGAGGTTAGTAGATTGAATGACCTGTATTCGTATATTTACGCATACAGGCCAAGCATTCTTTTTATTTTTGT
TTACGCCAAGCGATGAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMKEFAQNYEESKTTFPDSPFYR
LIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVVGLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP

Sequences:

>Translated_160_residues
MSKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMKEFAQNYEESKTTFPDSPFYR
LIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVVGLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP
>Mature_159_residues
SKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMKEFAQNYEESKTTFPDSPFYRL
IADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVVGLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=38.75, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009912 [H]

Pfam domain/function: PF07295 DUF1451 [H]

EC number: NA

Molecular weight: Translated: 18692; Mature: 18561

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMK
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EFAQNYEESKTTFPDSPFYRLIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
GLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
SKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTKDEMSLISNYVKRDMK
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EFAQNYEESKTTFPDSPFYRLIADSIWHGLLEITDKTQLEWREVFDDLEHQGVYQAGEVV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
GLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]