Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694523

Identifier: 209694523

GI number: 209694523

Start: 1053388

End: 1053621

Strand: Direct

Name: 209694523

Synonym: VSAL_I0956

Alternate gene names: NA

Gene position: 1053388-1053621 (Clockwise)

Preceding gene: 209694522

Following gene: 209694524

Centisome position: 31.68

GC content: 38.46

Gene sequence:

>234_bases
ATGAATACTTTTCTAATTACGTTTGGTGTTTTTCTTACTGTTATTGGTGCAATGGCTATTGGTTATATTGTACAACGTAA
AGTAGTGAAAGGCAGTTGTGGTGGCCTTGGTTCTGTTGGGATAGATAAAGTGTGTAACTGTCCAGAACCTTGTGATGCAC
GAAAAAAACGTGAAGCTAAAGAAATCATTCGAGCTGAAAAACTAGCTGCATGGGAAAAAGATCGCATCGCGTAA

Upstream 100 bases:

>100_bases
AACATAACATTCCTGTTTTCATGATTGTGAAAACTAAAAATGGCTTTAAAGAACTCTCTTCTGAAGCCTTTAAGCCTTTT
TTGAAATAAGTGAGTAGATA

Downstream 100 bases:

>100_bases
GTTTTTTACTCTATAACTATCTTAAAACAGCATCTTTATAGATGCTGTTTTTTATTGTAAAAAAATCATTTCATCGCTAT
TATTTAACTGTGTATTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Na(+)-Translocating NADH-Quinone Reductase Subunit E; Conserved Membrane; Exported Protein

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAKEIIRAEKLAAWEKDRIA

Sequences:

>Translated_77_residues
MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAKEIIRAEKLAAWEKDRIA
>Mature_77_residues
MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAKEIIRAEKLAAWEKDRIA

Specific function: Unknown

COG id: COG2991

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8386; Mature: 8386

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHH
EIIRAEKLAAWEKDRIA
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHH
EIIRAEKLAAWEKDRIA
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA