| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is panE [H]
Identifier: 209694510
GI number: 209694510
Start: 1039668
End: 1040567
Strand: Reverse
Name: panE [H]
Synonym: VSAL_I0942
Alternate gene names: 209694510
Gene position: 1040567-1039668 (Counterclockwise)
Preceding gene: 209694511
Following gene: 209694509
Centisome position: 31.29
GC content: 38.11
Gene sequence:
>900_bases ATGAGTGTGAATATCACCATTCTTGGCCCTGGAGCCGTAGGTTCATTGTGGGCATGTTATTTTCAAAAAGCAGGTCATAA CGTCTCTTTATGGACAAGAAATACCGTCCCTTCAGATATATCACTGTCTTTGTCTGCACAAGAAAACTCATCTCATCAAT TCTCTTGTGACAATCCTGAATCATTACCCCATTGTGATTTACTTTTTATTACAGTCAAAGCATGGCAAGTTAACCTCGCC CTTCTTCCGTTACTTCCTCTTTTATCAAAAGAGACCATATTGCTTTTCATGCATAATGGTATGGGTGCAATTGATACCAT GGAAAATGAACTAACGCATCACCCTATACTGCAAGCCACAACGACGCACGCGGCACTAAAACACAATAAAAACCACGTAG AGCATACTGGTGTAGGTGCAACGGTTATTGGTCCATTTAACTCATTAGGTAAGCAATGCTTATTTATGAAAGAGGTACTC GATCACTCTCTTACTAATGTTGAATGGAATGACTCAATCCAACCCGCACTTTGGAAAAAGCTCGCCATTAACTGCGCAAT AAACCCATTAACCGCAATCCATCAATGCAAAAATGGCGATCTACTGCATCCTAAATTGCATAGTGATGTTTTAACTATCT GTAATGAAGTCTATCTGGTGCTTGAAAAAAATCACAGTGATTGGTCTTTAAAGGAATTAATCACCACCGTTAATCAAGTG ATTACCGCAACGTCTGTAAATTACTCGTCAATGAATCGAGATTGTTTTTATCAACGAAAAAGTGAAATCGACTTCATTAC TGGTTATCTTTTACAGCAAGCCAAGAAACATCGCATTTCAATCCCAACCAACCAAGCCTTGTATAATAAAATTAAACAAT TAGAAGAGTACTTATTATGA
Upstream 100 bases:
>100_bases TTAAGCTAGAATCTCGATTTTATTAAGGCGCTCATCATGAGCGCCTTTGTTTTTTCCAGTAAACCCATTACACTACTTTC ATTATTTATCTTCGACGGAT
Downstream 100 bases:
>100_bases CCACCAATATTCTAGTCTGTCTTGCTCCCGGAACGGAAGAACTTGAAGCAATTACCGTTATTGATATTTTAGAGCGCGCT AAATTTAAGGTCACCATTGC
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSVNITILGPGAVGSLWACYFQKAGHNVSLWTRNTVPSDISLSLSAQENSSHQFSCDNPESLPHCDLLFITVKAWQVNLA LLPLLPLLSKETILLFMHNGMGAIDTMENELTHHPILQATTTHAALKHNKNHVEHTGVGATVIGPFNSLGKQCLFMKEVL DHSLTNVEWNDSIQPALWKKLAINCAINPLTAIHQCKNGDLLHPKLHSDVLTICNEVYLVLEKNHSDWSLKELITTVNQV ITATSVNYSSMNRDCFYQRKSEIDFITGYLLQQAKKHRISIPTNQALYNKIKQLEEYLL
Sequences:
>Translated_299_residues MSVNITILGPGAVGSLWACYFQKAGHNVSLWTRNTVPSDISLSLSAQENSSHQFSCDNPESLPHCDLLFITVKAWQVNLA LLPLLPLLSKETILLFMHNGMGAIDTMENELTHHPILQATTTHAALKHNKNHVEHTGVGATVIGPFNSLGKQCLFMKEVL DHSLTNVEWNDSIQPALWKKLAINCAINPLTAIHQCKNGDLLHPKLHSDVLTICNEVYLVLEKNHSDWSLKELITTVNQV ITATSVNYSSMNRDCFYQRKSEIDFITGYLLQQAKKHRISIPTNQALYNKIKQLEEYLL >Mature_298_residues SVNITILGPGAVGSLWACYFQKAGHNVSLWTRNTVPSDISLSLSAQENSSHQFSCDNPESLPHCDLLFITVKAWQVNLAL LPLLPLLSKETILLFMHNGMGAIDTMENELTHHPILQATTTHAALKHNKNHVEHTGVGATVIGPFNSLGKQCLFMKEVLD HSLTNVEWNDSIQPALWKKLAINCAINPLTAIHQCKNGDLLHPKLHSDVLTICNEVYLVLEKNHSDWSLKELITTVNQVI TATSVNYSSMNRDCFYQRKSEIDFITGYLLQQAKKHRISIPTNQALYNKIKQLEEYLL
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786627, Length=299, Percent_Identity=39.7993311036789, Blast_Score=203, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 33529; Mature: 33398
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNITILGPGAVGSLWACYFQKAGHNVSLWTRNTVPSDISLSLSAQENSSHQFSCDNPE CEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC SLPHCDLLFITVKAWQVNLALLPLLPLLSKETILLFMHNGMGAIDTMENELTHHPILQAT CCCCCEEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHH TTHAALKHNKNHVEHTGVGATVIGPFNSLGKQCLFMKEVLDHSLTNVEWNDSIQPALWKK HHHHHHHCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LAINCAINPLTAIHQCKNGDLLHPKLHSDVLTICNEVYLVLEKNHSDWSLKELITTVNQV HHHHCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHH ITATSVNYSSMNRDCFYQRKSEIDFITGYLLQQAKKHRISIPTNQALYNKIKQLEEYLL HHHCCCCHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SVNITILGPGAVGSLWACYFQKAGHNVSLWTRNTVPSDISLSLSAQENSSHQFSCDNPE EEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC SLPHCDLLFITVKAWQVNLALLPLLPLLSKETILLFMHNGMGAIDTMENELTHHPILQAT CCCCCEEEEEEEEEEEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHH TTHAALKHNKNHVEHTGVGATVIGPFNSLGKQCLFMKEVLDHSLTNVEWNDSIQPALWKK HHHHHHHCCCCCCEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LAINCAINPLTAIHQCKNGDLLHPKLHSDVLTICNEVYLVLEKNHSDWSLKELITTVNQV HHHHCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHH ITATSVNYSSMNRDCFYQRKSEIDFITGYLLQQAKKHRISIPTNQALYNKIKQLEEYLL HHHCCCCHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]