Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yaeP [C]

Identifier: 209694474

GI number: 209694474

Start: 1001328

End: 1001546

Strand: Direct

Name: yaeP [C]

Synonym: VSAL_I0900

Alternate gene names: 209694474

Gene position: 1001328-1001546 (Clockwise)

Preceding gene: 209694473

Following gene: 209694475

Centisome position: 30.11

GC content: 38.36

Gene sequence:

>219_bases
ATGGAAAGTATTATGAAAGTATACGATTGTTGTGACATGGTTCGTGAACTGTACTCATTAATTGGCAGTGGCGATCAAGG
TTATATTCCTCAAGCGATTAACTGTGCAGTTAAATCATTAAACGACATTGCAGCCGACGATTCTCTTCCAAAAGAAACCC
GTGAAAAAGCCGCATTTGCTGCTGCAAACTTATTAATTTCTGATTTTGAGGATGCGTAA

Upstream 100 bases:

>100_bases
TCCTAAGCTGAAAAACGTTTCCCCTTACGTTTTTCAGCTTTTTTTAATCTATGTTTTCCTTATTTCTCAGTGTAAACTTC
ATAACAGTTATCATTTTAAG

Downstream 100 bases:

>100_bases
TGACACCTGAAAAAGTCGCTTCAATGGATCCAATTATGTTAATGAGTATCGTTAATATGAAAATTCGTGATGAATTTGGG
GATCTTCACTGTTTCGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MESIMKVYDCCDMVRELYSLIGSGDQGYIPQAINCAVKSLNDIAADDSLPKETREKAAFAAANLLISDFEDA

Sequences:

>Translated_72_residues
MESIMKVYDCCDMVRELYSLIGSGDQGYIPQAINCAVKSLNDIAADDSLPKETREKAAFAAANLLISDFEDA
>Mature_72_residues
MESIMKVYDCCDMVRELYSLIGSGDQGYIPQAINCAVKSLNDIAADDSLPKETREKAAFAAANLLISDFEDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0253 family [H]

Homologues:

Organism=Escherichia coli, GI48994876, Length=59, Percent_Identity=55.9322033898305, Blast_Score=77, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009624
- ProDom:   PD054643 [H]

Pfam domain/function: PF06786 UPF0253 [H]

EC number: NA

Molecular weight: Translated: 7850; Mature: 7850

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIMKVYDCCDMVRELYSLIGSGDQGYIPQAINCAVKSLNDIAADDSLPKETREKAAFA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AANLLISDFEDA
HHHHHHHHCCCC
>Mature Secondary Structure
MESIMKVYDCCDMVRELYSLIGSGDQGYIPQAINCAVKSLNDIAADDSLPKETREKAAFA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AANLLISDFEDA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]