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The map label for this gene is smf [H]

Identifier: 209693701

GI number: 209693701

Start: 80351

End: 81460

Strand: Direct

Name: smf [H]

Synonym: VSAL_I0077

Alternate gene names: 209693701

Gene position: 80351-81460 (Clockwise)

Preceding gene: 209693700

Following gene: 209693702

Centisome position: 2.42

GC content: 43.24

Gene sequence:

>1110_bases
ATGTTTAACTCAGATAAACACTTATCTGCATGGTTAACTCTGTGCTTTTGTCCTCGAATTGGTGGGAAGGTAATGTCTCG
CCTACTTGCCATTGATTCTGTTGAAAATATTGTAAAGTACGATAAGGATAAATTGCAATCGATAGGGCTTTCTTGTGCGC
AAATTGCTTACATCCAGGCTGTGAATCATGAAGAAGTAGATAAATGCTTATTGTGGGAAGATGGAGATTCTCTTAATACC
ATTTTAACGTTATCTGATCCTCGCTATCCGAAGTTATTATCTGAAATAAGCGCCCCGCCGCCAGTATTATTTGTTAAAGG
TGATGTTTTGGCGCTATCTGAACCTCAAGTGGCTATTGTCGGTAGCCGTAATGCTAGCCTAGAAGGTTTAGAATGTGCGA
AGCAATTTGCGGCTTCCATTGTGCAGCATAATTATGTCGTTACTAGTGGTTTAGCTCTAGGGGTTGATGGATACGCCCAT
CATGGGGCGATTGAAGCGAAAGGACAAACTATTGCAGTACTTGGTTCTGGGTTAAACAAGGTATATCCAGCAAAACACAG
AACGCTGGCTGATCGTGTGATTCATAATGGGGCTTTAGTTTCTGAGTTTAGGCCAGATTCTCCCCCACGAGCGGACAATT
TTCCTCGTCGAAATCGCATTATTAGTGGGTTATCTACCGGGGTACTCGTTGTGGAAGCGGCTGAACGTTCTGGTTCTTTG
ATTACTGCAAGGTATGCGAATGAGCAAGGGCGAGAAGTGTTTGCTTTACCGGGATCAATACATAACCCTACAGCTCAAGG
TTCTAATTCTTTAATTAAAGCCGGTGCAAAGCTGGTTTCGTCACCGGAAGACATTTTTGAAGAGATCGGAGCATTAACCT
ATTGTGCAATCTCTCATCAACCTTCGCTTTTTGAGCAAGAAGTTGTCACAGAACAATTGCCATTTCCCAAAGTGTTCGCT
ACCGTAGGCATAGAGGCGACGCCTGTTGATATAATAGCAGAGCGATGTCAGACGCCTGTACATGAAATCATGATGCAATT
ACTTGAATTAGAGTTGCAAGGTTTCATCACTGCAGTCCCAGGGGGTTACATTAAAAAGCGGAGGGGCTAA

Upstream 100 bases:

>100_bases
GTCCTTATGAATCATTTAGTTTAGCGTTAATAACTCGCAGTGAAACGCCTATTCATAAGCGAATGATTGTGACCTCACCA
CAGACAAAATAGAGGGATTG

Downstream 100 bases:

>100_bases
TCATGATGGATGTTCTGATGTATCTATTTGAAACGTATATCCATAGCGATATCGAATTAACAGTAGATCAAGAAAAACTA
GAAGACGAATTACTAAAAGC

Product: Smf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MFNSDKHLSAWLTLCFCPRIGGKVMSRLLAIDSVENIVKYDKDKLQSIGLSCAQIAYIQAVNHEEVDKCLLWEDGDSLNT
ILTLSDPRYPKLLSEISAPPPVLFVKGDVLALSEPQVAIVGSRNASLEGLECAKQFAASIVQHNYVVTSGLALGVDGYAH
HGAIEAKGQTIAVLGSGLNKVYPAKHRTLADRVIHNGALVSEFRPDSPPRADNFPRRNRIISGLSTGVLVVEAAERSGSL
ITARYANEQGREVFALPGSIHNPTAQGSNSLIKAGAKLVSSPEDIFEEIGALTYCAISHQPSLFEQEVVTEQLPFPKVFA
TVGIEATPVDIIAERCQTPVHEIMMQLLELELQGFITAVPGGYIKKRRG

Sequences:

>Translated_369_residues
MFNSDKHLSAWLTLCFCPRIGGKVMSRLLAIDSVENIVKYDKDKLQSIGLSCAQIAYIQAVNHEEVDKCLLWEDGDSLNT
ILTLSDPRYPKLLSEISAPPPVLFVKGDVLALSEPQVAIVGSRNASLEGLECAKQFAASIVQHNYVVTSGLALGVDGYAH
HGAIEAKGQTIAVLGSGLNKVYPAKHRTLADRVIHNGALVSEFRPDSPPRADNFPRRNRIISGLSTGVLVVEAAERSGSL
ITARYANEQGREVFALPGSIHNPTAQGSNSLIKAGAKLVSSPEDIFEEIGALTYCAISHQPSLFEQEVVTEQLPFPKVFA
TVGIEATPVDIIAERCQTPVHEIMMQLLELELQGFITAVPGGYIKKRRG
>Mature_369_residues
MFNSDKHLSAWLTLCFCPRIGGKVMSRLLAIDSVENIVKYDKDKLQSIGLSCAQIAYIQAVNHEEVDKCLLWEDGDSLNT
ILTLSDPRYPKLLSEISAPPPVLFVKGDVLALSEPQVAIVGSRNASLEGLECAKQFAASIVQHNYVVTSGLALGVDGYAH
HGAIEAKGQTIAVLGSGLNKVYPAKHRTLADRVIHNGALVSEFRPDSPPRADNFPRRNRIISGLSTGVLVVEAAERSGSL
ITARYANEQGREVFALPGSIHNPTAQGSNSLIKAGAKLVSSPEDIFEEIGALTYCAISHQPSLFEQEVVTEQLPFPKVFA
TVGIEATPVDIIAERCQTPVHEIMMQLLELELQGFITAVPGGYIKKRRG

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=360, Percent_Identity=45.5555555555556, Blast_Score=277, Evalue=7e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39933; Mature: 39933

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNSDKHLSAWLTLCFCPRIGGKVMSRLLAIDSVENIVKYDKDKLQSIGLSCAQIAYIQA
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHH
VNHEEVDKCLLWEDGDSLNTILTLSDPRYPKLLSEISAPPPVLFVKGDVLALSEPQVAIV
CCHHHHHHEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCEEEECCCCEEEE
GSRNASLEGLECAKQFAASIVQHNYVVTSGLALGVDGYAHHGAIEAKGQTIAVLGSGLNK
ECCCCCCHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCCCCEEECCCCEEEEEECCCCC
VYPAKHRTLADRVIHNGALVSEFRPDSPPRADNFPRRNRIISGLSTGVLVVEAAERSGSL
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCE
ITARYANEQGREVFALPGSIHNPTAQGSNSLIKAGAKLVSSPEDIFEEIGALTYCAISHQ
EEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCHHEEEEECCC
PSLFEQEVVTEQLPFPKVFATVGIEATPVDIIAERCQTPVHEIMMQLLELELQGFITAVP
CCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECC
GGYIKKRRG
CCHHHCCCC
>Mature Secondary Structure
MFNSDKHLSAWLTLCFCPRIGGKVMSRLLAIDSVENIVKYDKDKLQSIGLSCAQIAYIQA
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHH
VNHEEVDKCLLWEDGDSLNTILTLSDPRYPKLLSEISAPPPVLFVKGDVLALSEPQVAIV
CCHHHHHHEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCEEEECCCCEEEE
GSRNASLEGLECAKQFAASIVQHNYVVTSGLALGVDGYAHHGAIEAKGQTIAVLGSGLNK
ECCCCCCHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCCCCEEECCCCEEEEEECCCCC
VYPAKHRTLADRVIHNGALVSEFRPDSPPRADNFPRRNRIISGLSTGVLVVEAAERSGSL
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCE
ITARYANEQGREVFALPGSIHNPTAQGSNSLIKAGAKLVSSPEDIFEEIGALTYCAISHQ
EEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCHHEEEEECCC
PSLFEQEVVTEQLPFPKVFATVGIEATPVDIIAERCQTPVHEIMMQLLELELQGFITAVP
CCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECC
GGYIKKRRG
CCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]