Click here to switch to the map view.

The map label for this gene is smg

Identifier: 209693702

GI number: 209693702

Start: 81463

End: 81936

Strand: Direct

Name: smg

Synonym: VSAL_I0078

Alternate gene names: 209693702

Gene position: 81463-81936 (Clockwise)

Preceding gene: 209693701

Following gene: 209693703

Centisome position: 2.45

GC content: 37.34

Gene sequence:

>474_bases
ATGATGGATGTTCTGATGTATCTATTTGAAACGTATATCCATAGCGATATCGAATTAACAGTAGATCAAGAAAAACTAGA
AGACGAATTACTAAAAGCAGGGTTTCACCAAGAGGCGATATATAAAGCGCTTGATTGGTTAGAAGACCTTGCTCATTTAC
AAGAAACTGACTCTCATGAGCATATTGCTAAGAGTACGTCGACGGCCATGCGAATTTATACTCAGCAAGAAATTGATGGT
ATTGATACGGTTTGCCGTGGGTTCTTATTGTTCCTTGAGCAAATTAAAGTATTAACGTGTGAAACTCGTGAAATGGTCAT
TGAACAAGTCATGACGTTAGAAACGGAAGATCTTTCTCTTGATGATCTGAAGTGGGTTATCTTAATGGTGCTATTTAATG
TACCAGGACAAGAAAGTGCGTATACCCAGATGGAAGAGTTACTTTATACTTCAGATACAGGTATGACTCATTAA

Upstream 100 bases:

>100_bases
CGCCTGTACATGAAATCATGATGCAATTACTTGAATTAGAGTTGCAAGGTTTCATCACTGCAGTCCCAGGGGGTTACATT
AAAAAGCGGAGGGGCTAATC

Downstream 100 bases:

>100_bases
GGTTAATGAATGTCAGGTAAAATAAACAAGCAACTGTTTCAAGCGCATGAACATGCATTAGATCATGAATCTTGCCCACA
ATGCAGTGGTGAACTTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MMDVLMYLFETYIHSDIELTVDQEKLEDELLKAGFHQEAIYKALDWLEDLAHLQETDSHEHIAKSTSTAMRIYTQQEIDG
IDTVCRGFLLFLEQIKVLTCETREMVIEQVMTLETEDLSLDDLKWVILMVLFNVPGQESAYTQMEELLYTSDTGMTH

Sequences:

>Translated_157_residues
MMDVLMYLFETYIHSDIELTVDQEKLEDELLKAGFHQEAIYKALDWLEDLAHLQETDSHEHIAKSTSTAMRIYTQQEIDG
IDTVCRGFLLFLEQIKVLTCETREMVIEQVMTLETEDLSLDDLKWVILMVLFNVPGQESAYTQMEELLYTSDTGMTH
>Mature_157_residues
MMDVLMYLFETYIHSDIELTVDQEKLEDELLKAGFHQEAIYKALDWLEDLAHLQETDSHEHIAKSTSTAMRIYTQQEIDG
IDTVCRGFLLFLEQIKVLTCETREMVIEQVMTLETEDLSLDDLKWVILMVLFNVPGQESAYTQMEELLYTSDTGMTH

Specific function: Unknown

COG id: COG2922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smg family

Homologues:

Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=61.1464968152866, Blast_Score=191, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMG_ALISL (B6EP24)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002261630.1
- GeneID:   6989249
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0078
- HOGENOM:   HBG518884
- OMA:   EMRVDQD
- ProtClustDB:   PRK03430
- HAMAP:   MF_00598
- InterPro:   IPR007456

Pfam domain/function: PF04361 DUF494

EC number: NA

Molecular weight: Translated: 18289; Mature: 18289

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDVLMYLFETYIHSDIELTVDQEKLEDELLKAGFHQEAIYKALDWLEDLAHLQETDSHE
CHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH
HIAKSTSTAMRIYTQQEIDGIDTVCRGFLLFLEQIKVLTCETREMVIEQVMTLETEDLSL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DDLKWVILMVLFNVPGQESAYTQMEELLYTSDTGMTH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMDVLMYLFETYIHSDIELTVDQEKLEDELLKAGFHQEAIYKALDWLEDLAHLQETDSHE
CHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH
HIAKSTSTAMRIYTQQEIDGIDTVCRGFLLFLEQIKVLTCETREMVIEQVMTLETEDLSL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DDLKWVILMVLFNVPGQESAYTQMEELLYTSDTGMTH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA