| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551855
Identifier: 209551855
GI number: 209551855
Start: 4458402
End: 4459655
Strand: Reverse
Name: 209551855
Synonym: Rleg2_4287
Alternate gene names: NA
Gene position: 4459655-4458402 (Counterclockwise)
Preceding gene: 209551856
Following gene: 209551853
Centisome position: 98.27
GC content: 62.6
Gene sequence:
>1254_bases ATGACTTTCATGCCCCAGAGCCAGAACACCATCGATCCCGTCAAGCTGGAGAAGCTTGCCGAGGTCGCCGTCAAGGTCGG TCTGCAGCTGCGCAAAGGTCAGGATCTGGTCGTCACCGCGCCTGTGGTCGCGCTGCCGCTCGTTCGCCTCATCACCAAGC ACGCCTATCAGGCCGGCGCCGGGCTGGTGACCGCCTTCTATTCGGACGAGGAAACGACGCTTTCTCGCTATCAGTACGGC AGCGACGAGAGCTTCGACCGCGCCTCCGACTGGCTCTATGAAGGCATGGCCAAGGCCTATGCCAACGGCGCGGCGCGCCT TGCGGTATCAGGCGACAATCCGCTGCTGCTGTCCGAGCAAGATGCCGGCAAGGTCGGCCGCGCCAATCGCGCCACCTCTA CCGCCTACAAGCCGGCGCTGGAAAAGATTTCGAATTTCGACATCAACTGGAACATCGTCTCCTATCCCAATCCGTCCTGG GCCAAGGTGGTCTTTCCCGACGATCCGGAGCCGATCGCGATCGCCAAGCTCGCCAAGGCGATCTTTGCCGCCTCGCGCGT CGATGTGGACGATCCGATCGCCGCCTGGGCCGAACACAATGCCAATCTGGCCAAGCGCTCCGCCTGGCTGAATGGCGAGC GCTTCGCTTCGCTGCATTTCAGGGGACCCGGCACCGATCTGACGGTCGGCCTTGCCGACGGGCATGAATGGCATGGCGGC GCTTCCACCGCCAAGAACGGCATTACCTGCAACCCGAACATTCCGACCGAGGAAGTCTTCACCACGCCGCATGCGCTGCG TGTCGAAGGCCATGTTTCGAGCACCAAACCGCTGTCGCACCAGGGCACGCTGATCGACAATATCCAGGTGCGCTTCGAGG CCGGACGCATCGTCGAGGCGAAGGCGTCGCGCGGCGAAGAGGTCTTGAACAAGGTGCTCGATACCGACGAGGGCGCCCTC CGGCTTGGCGAAGTGGCGCTGGTGCCGCACTCCTCGCCGATCTCGGCCAGCGGCATCCTGTTCTACAACACGCTGTTCGA CGAAAATGCCTCGTGCCACATCGCCCTCGGCCAGTGCTATTCCAAATGCTTCCTGAACGGCGCGACGCTGAGCCAGGAAG AGATCAAGGCGCAGGGCGGCAATTCCAGCCTGATCCATATCGACTGGATGATCGGCTCGAACAAGGTCGATATCGACGGT CTCAAGCCGGATGGTTCGCGGGTTCCGGTGATGCGGCAGGGCGAATGGGCCTGA
Upstream 100 bases:
>100_bases CCGGCCGCCGGCAATTCGGCGACACAACGCTTCATTTTCGCCGCAAACGGGTCTAAGTCTGCCAGCCTCAAAGCATCATC GACAGAAAGCAGGTTGAGCC
Downstream 100 bases:
>100_bases CCGGCATCGTGGCGCGCTGACTGAGCCAGACGCTGGCGAGCACCATGGCGAAGCCGGCGATCTGCACCGGCGCCAGGCTC TGGCCGAGCGCCAGCCAGCC
Product: peptidase M29 aminopeptidase II
Products: NA
Alternate protein names: AP-T; Heat-stable aminopeptidase [H]
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MTFMPQSQNTIDPVKLEKLAEVAVKVGLQLRKGQDLVVTAPVVALPLVRLITKHAYQAGAGLVTAFYSDEETTLSRYQYG SDESFDRASDWLYEGMAKAYANGAARLAVSGDNPLLLSEQDAGKVGRANRATSTAYKPALEKISNFDINWNIVSYPNPSW AKVVFPDDPEPIAIAKLAKAIFAASRVDVDDPIAAWAEHNANLAKRSAWLNGERFASLHFRGPGTDLTVGLADGHEWHGG ASTAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEAGRIVEAKASRGEEVLNKVLDTDEGAL RLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCYSKCFLNGATLSQEEIKAQGGNSSLIHIDWMIGSNKVDIDG LKPDGSRVPVMRQGEWA
Sequences:
>Translated_417_residues MTFMPQSQNTIDPVKLEKLAEVAVKVGLQLRKGQDLVVTAPVVALPLVRLITKHAYQAGAGLVTAFYSDEETTLSRYQYG SDESFDRASDWLYEGMAKAYANGAARLAVSGDNPLLLSEQDAGKVGRANRATSTAYKPALEKISNFDINWNIVSYPNPSW AKVVFPDDPEPIAIAKLAKAIFAASRVDVDDPIAAWAEHNANLAKRSAWLNGERFASLHFRGPGTDLTVGLADGHEWHGG ASTAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEAGRIVEAKASRGEEVLNKVLDTDEGAL RLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCYSKCFLNGATLSQEEIKAQGGNSSLIHIDWMIGSNKVDIDG LKPDGSRVPVMRQGEWA >Mature_416_residues TFMPQSQNTIDPVKLEKLAEVAVKVGLQLRKGQDLVVTAPVVALPLVRLITKHAYQAGAGLVTAFYSDEETTLSRYQYGS DESFDRASDWLYEGMAKAYANGAARLAVSGDNPLLLSEQDAGKVGRANRATSTAYKPALEKISNFDINWNIVSYPNPSWA KVVFPDDPEPIAIAKLAKAIFAASRVDVDDPIAAWAEHNANLAKRSAWLNGERFASLHFRGPGTDLTVGLADGHEWHGGA STAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEAGRIVEAKASRGEEVLNKVLDTDEGALR LGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCYSKCFLNGATLSQEEIKAQGGNSSLIHIDWMIGSNKVDIDGL KPDGSRVPVMRQGEWA
Specific function: Metal-dependent exopeptidase [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 45063; Mature: 44932
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFMPQSQNTIDPVKLEKLAEVAVKVGLQLRKGQDLVVTAPVVALPLVRLITKHAYQAGA CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHHCCC GLVTAFYSDEETTLSRYQYGSDESFDRASDWLYEGMAKAYANGAARLAVSGDNPLLLSEQ CEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECC DAGKVGRANRATSTAYKPALEKISNFDINWNIVSYPNPSWAKVVFPDDPEPIAIAKLAKA CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH IFAASRVDVDDPIAAWAEHNANLAKRSAWLNGERFASLHFRGPGTDLTVGLADGHEWHGG HHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCC ASTAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEAGRIVEA CCCCCCCEEECCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCEEEC KASRGEEVLNKVLDTDEGALRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCY HHCCCHHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHHHHH SKCFLNGATLSQEEIKAQGGNSSLIHIDWMIGSNKVDIDGLKPDGSRVPVMRQGEWA HHHHCCCCCCCHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCEECCCCCC >Mature Secondary Structure TFMPQSQNTIDPVKLEKLAEVAVKVGLQLRKGQDLVVTAPVVALPLVRLITKHAYQAGA CCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHHCCC GLVTAFYSDEETTLSRYQYGSDESFDRASDWLYEGMAKAYANGAARLAVSGDNPLLLSEQ CEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECC DAGKVGRANRATSTAYKPALEKISNFDINWNIVSYPNPSWAKVVFPDDPEPIAIAKLAKA CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH IFAASRVDVDDPIAAWAEHNANLAKRSAWLNGERFASLHFRGPGTDLTVGLADGHEWHGG HHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCC ASTAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEAGRIVEA CCCCCCCEEECCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCEEEC KASRGEEVLNKVLDTDEGALRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCY HHCCCHHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHHHHH SKCFLNGATLSQEEIKAQGGNSSLIHIDWMIGSNKVDIDGLKPDGSRVPVMRQGEWA HHHHCCCCCCCHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9362117 [H]