| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is phnE [H]
Identifier: 209551686
GI number: 209551686
Start: 4296543
End: 4297502
Strand: Reverse
Name: phnE [H]
Synonym: Rleg2_4115
Alternate gene names: 209551686
Gene position: 4297502-4296543 (Counterclockwise)
Preceding gene: 209551687
Following gene: 209551685
Centisome position: 94.7
GC content: 60.94
Gene sequence:
>960_bases ATGACTGTTGCCGATACACAGCCGCACATGCAGAGCACCAGGGATATCCGCACCGCCTGGGAGCGGATGGTCGCCAGGCG CCGTTTCTACACCATCCTCGGCCTGGTTATCCTGATTGCGGCTTTCGTCAGTTCCGTCCGCTTCGCCGACGAGAGCAATG CCGGCCATTTCTTCGACCGCCTGCCGCATCTCTTCGACTTTTTGAGCTGGCTCATCCCCAAGGATTGGAACGATGTCTGG CGCGCGCTGTTCGACATTGCGAGCGTCAACGACAAGGGCGGCGAGGAGTTCAATTTCGACAAGGGCCGCGTCTATATTTC AGGCGCCTTCTACATTCCCGAATGTTTCGAGCTGATGATCGTCACGATCAATGTGGCGCTGATCTCGACGATCGTCGCCT TCGTCTTTGCCGTTCCGTTGAGTTTTTTTGCCGCGCGCAACCTGACGAGTTCCTGGCCGCTGCGCGTCTTCACCAAGCGC CTGATGGAATTCCTGCGCGCCTTCCCCGAGATCGTCATTGCCGGCCTGTTTTCGGCGATCCTGTCGATCGGGCCGGTCGC CGCCATCATCGCCATCACCCTGCACACGATCGGCGCGCTCGGCAAACTCTTCTACGAAGTGGCAGAGAATATCGACATGA AGCCGCATGAGGGCATGAAGGCCGTCGGCGCCAACTGGTGGGAGCGCGTGCGCTTCGCGGCTCTGCCGCAGGTGCTACCG AATTTCACCTCCTATGCGCTCTTGCGCCTCGAGATCAACGTGCGTGCCTCGACCATCATCGGCGCCGTCGGCGGCGGCGG TATCGGCGAGGAACTGAAGCTTTCGATCTCGCGCGGCTTCGGCGCCAAGACGATGGCGCTGGTTCTGCTGCTGTTCGTGA CGATCGTCGCCGTCGACCAGTTCTCCGCATGGCTGCGCCGCCGCCTCGTCGGCGAGCATGCCTTCCTCCTGCAACATTGA
Upstream 100 bases:
>100_bases TCGTCGAAGTGCGTAAGGCTGCCATCGGCGGCTGATCGGCCGTTGGAATGCGGGGCGGCCGGAAACGGCCGCCCTTTATC TTCGATCGGGCGAGGCGTCC
Downstream 100 bases:
>100_bases GGCTGCCATGACGGTGATCGACGCAAACCGCATGAACGAAATCGAAGCGCGCTATCCGGAATATTTCCACCGGTCGTTCC GCCAGCGTTTCGGCGGGCTG
Product: phosphonate ABC transporter inner membrane subunit
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTVADTQPHMQSTRDIRTAWERMVARRRFYTILGLVILIAAFVSSVRFADESNAGHFFDRLPHLFDFLSWLIPKDWNDVW RALFDIASVNDKGGEEFNFDKGRVYISGAFYIPECFELMIVTINVALISTIVAFVFAVPLSFFAARNLTSSWPLRVFTKR LMEFLRAFPEIVIAGLFSAILSIGPVAAIIAITLHTIGALGKLFYEVAENIDMKPHEGMKAVGANWWERVRFAALPQVLP NFTSYALLRLEINVRASTIIGAVGGGGIGEELKLSISRGFGAKTMALVLLLFVTIVAVDQFSAWLRRRLVGEHAFLLQH
Sequences:
>Translated_319_residues MTVADTQPHMQSTRDIRTAWERMVARRRFYTILGLVILIAAFVSSVRFADESNAGHFFDRLPHLFDFLSWLIPKDWNDVW RALFDIASVNDKGGEEFNFDKGRVYISGAFYIPECFELMIVTINVALISTIVAFVFAVPLSFFAARNLTSSWPLRVFTKR LMEFLRAFPEIVIAGLFSAILSIGPVAAIIAITLHTIGALGKLFYEVAENIDMKPHEGMKAVGANWWERVRFAALPQVLP NFTSYALLRLEINVRASTIIGAVGGGGIGEELKLSISRGFGAKTMALVLLLFVTIVAVDQFSAWLRRRLVGEHAFLLQH >Mature_318_residues TVADTQPHMQSTRDIRTAWERMVARRRFYTILGLVILIAAFVSSVRFADESNAGHFFDRLPHLFDFLSWLIPKDWNDVWR ALFDIASVNDKGGEEFNFDKGRVYISGAFYIPECFELMIVTINVALISTIVAFVFAVPLSFFAARNLTSSWPLRVFTKRL MEFLRAFPEIVIAGLFSAILSIGPVAAIIAITLHTIGALGKLFYEVAENIDMKPHEGMKAVGANWWERVRFAALPQVLPN FTSYALLRLEINVRASTIIGAVGGGGIGEELKLSISRGFGAKTMALVLLLFVTIVAVDQFSAWLRRRLVGEHAFLLQH
Specific function: Part of the binding-protein-dependent transport system for phosphonates; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35759; Mature: 35628
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVADTQPHMQSTRDIRTAWERMVARRRFYTILGLVILIAAFVSSVRFADESNAGHFFDR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LPHLFDFLSWLIPKDWNDVWRALFDIASVNDKGGEEFNFDKGRVYISGAFYIPECFELMI HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHH VTINVALISTIVAFVFAVPLSFFAARNLTSSWPLRVFTKRLMEFLRAFPEIVIAGLFSAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIGPVAAIIAITLHTIGALGKLFYEVAENIDMKPHEGMKAVGANWWERVRFAALPQVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NFTSYALLRLEINVRASTIIGAVGGGGIGEELKLSISRGFGAKTMALVLLLFVTIVAVDQ CHHHHEEEEEEEEEEHHHHEECCCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHH FSAWLRRRLVGEHAFLLQH HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVADTQPHMQSTRDIRTAWERMVARRRFYTILGLVILIAAFVSSVRFADESNAGHFFDR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LPHLFDFLSWLIPKDWNDVWRALFDIASVNDKGGEEFNFDKGRVYISGAFYIPECFELMI HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHH VTINVALISTIVAFVFAVPLSFFAARNLTSSWPLRVFTKRLMEFLRAFPEIVIAGLFSAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIGPVAAIIAITLHTIGALGKLFYEVAENIDMKPHEGMKAVGANWWERVRFAALPQVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NFTSYALLRLEINVRASTIIGAVGGGGIGEELKLSISRGFGAKTMALVLLLFVTIVAVDQ CHHHHEEEEEEEEEEHHHHEECCCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHH FSAWLRRRLVGEHAFLLQH HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]