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The map label for this gene is phnD [H]

Identifier: 209551687

GI number: 209551687

Start: 4297568

End: 4298473

Strand: Reverse

Name: phnD [H]

Synonym: Rleg2_4116

Alternate gene names: 209551687

Gene position: 4298473-4297568 (Counterclockwise)

Preceding gene: 209551688

Following gene: 209551686

Centisome position: 94.72

GC content: 62.03

Gene sequence:

>906_bases
ATGTTGAAGAAAGCACTCTTTGCGGCAACGGCGCTCTTCGCGCTCGCCGGCGCTGCCCATGCAGCCGATCTCAAGGAATT
CCGTATCGGCATTCTCGGCGGCGAAAACGAAACCGACCGCCTGCGCAACTATGCCTGCCTTGCCGACCACCTGAAGCAGG
AATTCGGCTTCGAGAAGGTGTCGCTGTTCCCGGCCGCCGATTATGACGGCGTCATCCAGGGCCTGCTCGGCGGTACGCTC
GACTTCGCCGAACTCGGCGCTTCCGGCTATGCAGCCGTCTACATCAAGGATCCGAAGGCTGTTACGCCGATCCTGACGAC
GCAGCAGAAGGACGGCTCGACCGGCTACCACTCGATCGGCCTCGCTCTGAAGTCCTCGGGCATCAAGACCATCCAGGACG
CCAAGGGCAAGAAGCTCGGCTATGCCGATCCGGACTCCACCTCGGGCTATCTCGTTCCGCTGACGCAGATCCCGAAGGAC
ACGGGCATGCCGAACGACAAGTTCTTCGCCTCGACCCAGTTCAACGGCGGCCATGAGAACAACCTTCTCGCCGCTTACGA
CGGCAAGGTCGACGTCGCCGTCGACGATTCCTCGGGCATCGGCGATTTCAAGGATGGCTACACCTCCGGCACCTTCCGCA
AGGAAGTCGACAAGGGCGCCGTCGATCCGAACAAGCTGGTCGAAGTCTGGCGTTCGCCGCTGATCCCGAACGGCCCGCTC
GTCGTTCGCAACGCTCTCGGCCAGGACTGGCAGACGAAGCTCGCAGCCTTCTTCACGGCCCTGCCTGAGAAGGATCACAA
GTGCTTCGCAGCCATCGAGGGCGGCGACTACAAGGGCTACGCCCCCGTCAAGCACGAATTCTACAACACCGTCGTCGAAG
TGCGTAAGGCTGCCATCGGCGGCTGA

Upstream 100 bases:

>100_bases
GGCCGGTCTCTGAGCGAGGCGGCCGCGATCGAGCGCCCGCGTCAAGGGCACACTTCTTCGTAACGGAAGACCGGGGGCAC
CGGTCAATAGGAGAGACCAC

Downstream 100 bases:

>100_bases
TCGGCCGTTGGAATGCGGGGCGGCCGGAAACGGCCGCCCTTTATCTTCGATCGGGCGAGGCGTCCATGACTGTTGCCGAT
ACACAGCCGCACATGCAGAG

Product: phosphonate ABC transporter periplasmic phosphonate binding protein

Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLKKALFAATALFALAGAAHAADLKEFRIGILGGENETDRLRNYACLADHLKQEFGFEKVSLFPAADYDGVIQGLLGGTL
DFAELGASGYAAVYIKDPKAVTPILTTQQKDGSTGYHSIGLALKSSGIKTIQDAKGKKLGYADPDSTSGYLVPLTQIPKD
TGMPNDKFFASTQFNGGHENNLLAAYDGKVDVAVDDSSGIGDFKDGYTSGTFRKEVDKGAVDPNKLVEVWRSPLIPNGPL
VVRNALGQDWQTKLAAFFTALPEKDHKCFAAIEGGDYKGYAPVKHEFYNTVVEVRKAAIGG

Sequences:

>Translated_301_residues
MLKKALFAATALFALAGAAHAADLKEFRIGILGGENETDRLRNYACLADHLKQEFGFEKVSLFPAADYDGVIQGLLGGTL
DFAELGASGYAAVYIKDPKAVTPILTTQQKDGSTGYHSIGLALKSSGIKTIQDAKGKKLGYADPDSTSGYLVPLTQIPKD
TGMPNDKFFASTQFNGGHENNLLAAYDGKVDVAVDDSSGIGDFKDGYTSGTFRKEVDKGAVDPNKLVEVWRSPLIPNGPL
VVRNALGQDWQTKLAAFFTALPEKDHKCFAAIEGGDYKGYAPVKHEFYNTVVEVRKAAIGG
>Mature_301_residues
MLKKALFAATALFALAGAAHAADLKEFRIGILGGENETDRLRNYACLADHLKQEFGFEKVSLFPAADYDGVIQGLLGGTL
DFAELGASGYAAVYIKDPKAVTPILTTQQKDGSTGYHSIGLALKSSGIKTIQDAKGKKLGYADPDSTSGYLVPLTQIPKD
TGMPNDKFFASTQFNGGHENNLLAAYDGKVDVAVDDSSGIGDFKDGYTSGTFRKEVDKGAVDPNKLVEVWRSPLIPNGPL
VVRNALGQDWQTKLAAFFTALPEKDHKCFAAIEGGDYKGYAPVKHEFYNTVVEVRKAAIGG

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates [H]

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790543, Length=309, Percent_Identity=29.7734627831715, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017797
- InterPro:   IPR005770 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32192; Mature: 32192

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKALFAATALFALAGAAHAADLKEFRIGILGGENETDRLRNYACLADHLKQEFGFEKV
CCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEE
SLFPAADYDGVIQGLLGGTLDFAELGASGYAAVYIKDPKAVTPILTTQQKDGSTGYHSIG
EEECCCCHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCCHHHEE
LALKSSGIKTIQDAKGKKLGYADPDSTSGYLVPLTQIPKDTGMPNDKFFASTQFNGGHEN
EEECCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCEEEEECCCCCCCC
NLLAAYDGKVDVAVDDSSGIGDFKDGYTSGTFRKEVDKGAVDPNKLVEVWRSPLIPNGPL
CEEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCE
VVRNALGQDWQTKLAAFFTALPEKDHKCFAAIEGGDYKGYAPVKHEFYNTVVEVRKAAIG
EEEHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MLKKALFAATALFALAGAAHAADLKEFRIGILGGENETDRLRNYACLADHLKQEFGFEKV
CCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEE
SLFPAADYDGVIQGLLGGTLDFAELGASGYAAVYIKDPKAVTPILTTQQKDGSTGYHSIG
EEECCCCHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCCHHHEE
LALKSSGIKTIQDAKGKKLGYADPDSTSGYLVPLTQIPKDTGMPNDKFFASTQFNGGHEN
EEECCCCCCHHHHCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCEEEEECCCCCCCC
NLLAAYDGKVDVAVDDSSGIGDFKDGYTSGTFRKEVDKGAVDPNKLVEVWRSPLIPNGPL
CEEEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCE
VVRNALGQDWQTKLAAFFTALPEKDHKCFAAIEGGDYKGYAPVKHEFYNTVVEVRKAAIG
EEEHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]

Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]