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The map label for this gene is rsmC [H]

Identifier: 209551632

GI number: 209551632

Start: 4234704

End: 4235720

Strand: Reverse

Name: rsmC [H]

Synonym: Rleg2_4061

Alternate gene names: 209551632

Gene position: 4235720-4234704 (Counterclockwise)

Preceding gene: 209551633

Following gene: 209551626

Centisome position: 93.34

GC content: 66.08

Gene sequence:

>1017_bases
ATGAGCCGCGAGACGCTGAAGACCCTGTTCCATCCCTTTGCCAGCGGCACGGTCGCGGCGCCCGGCGAGGGCGAGCGCGT
GCTCTTCCTCGGCGCCGAGGCAGGCTTTGCGCTGCCGGAAGGTTTTGCCGCCACGCTCAGCGCTGTCCAAGGCTTCCGGC
CGCTCTACCGGCAGCTTCAGGCGCAGCGGATCGAAGCAAAGCCCGAGATCGACGGCGAGGACTACGATGCCGCGCTGGTG
CTCTGCACGAAGCACAAGGGCGAGAACGAGGCCAATCTTGCCGCCGCCATCGCCCGCACACGGGTCGGCGGCCTGATCGT
CGTTGCCGGCGCCAAGGAAGACGGCATTCAGCCGCTGCGCAAGCGCCTCGAAGGTTTCGGCCTCGCCATCGACCATATGC
CGAAATATCACGGCGTCGCCTTTTGGTTCGGCCGCCCTGCCGATGCCGACGAGATCGTCTCCAAGCTGGCAAAGGCGCCG
GTGCGCGTCGACGGCCGCTTCAATGCGACCGCCGGCATGTTCTCGCATGACCGGATCGATGCCGGGTCGGAACTGCTCGC
CTCGCGCTTACCGCAGGATTTTACCGGCGACGTGGCGGATTTCGGTGCCGGATGGGGTTACCTCTCCGTCGAGCTGGCAC
AGAGGTCGCGCGGACTGACCCGCCTCGACCTCTACGAGGCCGATCACGCGGCTCTGGAGGCTGCTAGGGATAATCTGGCG
GAGAACTGCCCGAACGCGCCTGCGCGCTTCTTCTGGCACGATCTGGCGGGTGAGCCGGTCAAGGACAAATACGATCTCGT
CATCATGAACCCGCCCTTCCACGAGGGGCACGCCGCCGATCCAGCGCTCGGCCAGGCAATGATCAAGACCGCCGCATCGG
CCCTTCGCGGCGGCGGCCGCCTGATGCTGGTCGCCAATCGCGGCCTGCCCTATGAGCCGGTTCTGGCAGCGAACTTCAGA
GAAAGCGGCGAAACCTGCCGCAACGCCCGCTTCAAGGTGCTCTGGGCGAAGAAATAG

Upstream 100 bases:

>100_bases
CGGGAATCTTCCGCGCCCTTTTTGTATCCTGGTTTTGCGCATGTCGTGGCCGCAGAACCGCTCAAACTTTTGCGCGACAT
GCTTTAACGAGACGAGACCC

Downstream 100 bases:

>100_bases
AGTTCAGGCGGCTTCGATTTCCTTGCGGGCCGCACTCGCAAGGAAAGCCGAACGGGTCAGACCACGCTCTTTTGCAGCCT
TGTCGATTGCCTCAAGCATG

Product: methyltransferase small

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSRETLKTLFHPFASGTVAAPGEGERVLFLGAEAGFALPEGFAATLSAVQGFRPLYRQLQAQRIEAKPEIDGEDYDAALV
LCTKHKGENEANLAAAIARTRVGGLIVVAGAKEDGIQPLRKRLEGFGLAIDHMPKYHGVAFWFGRPADADEIVSKLAKAP
VRVDGRFNATAGMFSHDRIDAGSELLASRLPQDFTGDVADFGAGWGYLSVELAQRSRGLTRLDLYEADHAALEAARDNLA
ENCPNAPARFFWHDLAGEPVKDKYDLVIMNPPFHEGHAADPALGQAMIKTAASALRGGGRLMLVANRGLPYEPVLAANFR
ESGETCRNARFKVLWAKK

Sequences:

>Translated_338_residues
MSRETLKTLFHPFASGTVAAPGEGERVLFLGAEAGFALPEGFAATLSAVQGFRPLYRQLQAQRIEAKPEIDGEDYDAALV
LCTKHKGENEANLAAAIARTRVGGLIVVAGAKEDGIQPLRKRLEGFGLAIDHMPKYHGVAFWFGRPADADEIVSKLAKAP
VRVDGRFNATAGMFSHDRIDAGSELLASRLPQDFTGDVADFGAGWGYLSVELAQRSRGLTRLDLYEADHAALEAARDNLA
ENCPNAPARFFWHDLAGEPVKDKYDLVIMNPPFHEGHAADPALGQAMIKTAASALRGGGRLMLVANRGLPYEPVLAANFR
ESGETCRNARFKVLWAKK
>Mature_337_residues
SRETLKTLFHPFASGTVAAPGEGERVLFLGAEAGFALPEGFAATLSAVQGFRPLYRQLQAQRIEAKPEIDGEDYDAALVL
CTKHKGENEANLAAAIARTRVGGLIVVAGAKEDGIQPLRKRLEGFGLAIDHMPKYHGVAFWFGRPADADEIVSKLAKAPV
RVDGRFNATAGMFSHDRIDAGSELLASRLPQDFTGDVADFGAGWGYLSVELAQRSRGLTRLDLYEADHAALEAARDNLAE
NCPNAPARFFWHDLAGEPVKDKYDLVIMNPPFHEGHAADPALGQAMIKTAASALRGGGRLMLVANRGLPYEPVLAANFRE
SGETCRNARFKVLWAKK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=267, Percent_Identity=32.2097378277154, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082206, Length=243, Percent_Identity=28.3950617283951, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 36566; Mature: 36435

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRETLKTLFHPFASGTVAAPGEGERVLFLGAEAGFALPEGFAATLSAVQGFRPLYRQLQ
CCHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQRIEAKPEIDGEDYDAALVLCTKHKGENEANLAAAIARTRVGGLIVVAGAKEDGIQPLR
HHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
KRLEGFGLAIDHMPKYHGVAFWFGRPADADEIVSKLAKAPVRVDGRFNATAGMFSHDRID
HHHHHCCEEHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
AGSELLASRLPQDFTGDVADFGAGWGYLSVELAQRSRGLTRLDLYEADHAALEAARDNLA
CHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEEHHHHCCCEEEEEHHHHHHHHHHHHHHHH
ENCPNAPARFFWHDLAGEPVKDKYDLVIMNPPFHEGHAADPALGQAMIKTAASALRGGGR
HHCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
LMLVANRGLPYEPVLAANFRESGETCRNARFKVLWAKK
EEEEECCCCCCCCCHHCCCHHHHHHHHCCEEEEEEECC
>Mature Secondary Structure 
SRETLKTLFHPFASGTVAAPGEGERVLFLGAEAGFALPEGFAATLSAVQGFRPLYRQLQ
CHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQRIEAKPEIDGEDYDAALVLCTKHKGENEANLAAAIARTRVGGLIVVAGAKEDGIQPLR
HHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
KRLEGFGLAIDHMPKYHGVAFWFGRPADADEIVSKLAKAPVRVDGRFNATAGMFSHDRID
HHHHHCCEEHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
AGSELLASRLPQDFTGDVADFGAGWGYLSVELAQRSRGLTRLDLYEADHAALEAARDNLA
CHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEEHHHHCCCEEEEEHHHHHHHHHHHHHHHH
ENCPNAPARFFWHDLAGEPVKDKYDLVIMNPPFHEGHAADPALGQAMIKTAASALRGGGR
HHCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
LMLVANRGLPYEPVLAANFRESGETCRNARFKVLWAKK
EEEEECCCCCCCCCHHCCCHHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA