| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is fur [C]
Identifier: 209551626
GI number: 209551626
Start: 4230686
End: 4231105
Strand: Reverse
Name: fur [C]
Synonym: Rleg2_4055
Alternate gene names: 209551626
Gene position: 4231105-4230686 (Counterclockwise)
Preceding gene: 209551632
Following gene: 209551624
Centisome position: 93.24
GC content: 63.1
Gene sequence:
>420_bases ATGACGGGTGCACTCCCGATCGCCATAGAGGTCAGGCTGCGCGGCGCAGGCCTTCGGCCTACCCGCCAGCGCGTCGCGCT CGGCGACCTGCTGTTTGCCAAGGGTGACCGGCATTTGACGGTCGAGGAACTGCATGAGGAGGCGGTTGCCGCCGGCGTGC CGGTGTCACTGGCAACCGTCTACAACACGCTGCATCAGTTCACCGAAGCCGGCCTCATCCGCGTTCTCGCCGTCGAGAGC GCCAAGACCTATTTCGACACCAATGTTTCCGACCACCACCATTTCTTCGTCGAAGGCGAAAACGAGGTGCTCGACATTCC CGTCAGCAACCTGACGATCGCCAATCTGCCGGAGCCGCCTGAAGGCATGGAGATCGCCCATGTCGACGTGGTGATCCGGC TGCGGGCGAAGCAAGGCTGA
Upstream 100 bases:
>100_bases GCTCTTGTCCCCATTGAACTATTGAAAGGCTCCTGTGCAAAAGTTATACCGCTTGAAGAAACATGATTGAATTATGCAGG AATAACCGGAGTTGGTTTTG
Downstream 100 bases:
>100_bases CAACACGCTGTTTCACATGACATCGTCGGGGTGCCGGCCGGGCTTGTGCCTGTAAGTCGGAAAAGTCCAGCCGAACCACA GAGCGCCGCCGCGCACCGCA
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: Ferric Uptake Regulator Fur Family; Transcriptional Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Ferric Uptake Regulator; Iron Response Regulator; Fe2+/Zn2+ Uptake Regulation Protein; Fur Family Transcriptional Regulator; Fur Family Ferric Uptake Regulator; Ferric Uptake Regulator FUR Family; Ferric Uptake Regulation Protein; Transcriptional Regulator; Ferric Uptake Transcriptional Regulator; Transcriptional Regulator Fur Family Protein; Iron Response Regulator Irr; Transcription Regulator; Iron Transcriptional Regulator Protein
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTGALPIAIEVRLRGAGLRPTRQRVALGDLLFAKGDRHLTVEELHEEAVAAGVPVSLATVYNTLHQFTEAGLIRVLAVES AKTYFDTNVSDHHHFFVEGENEVLDIPVSNLTIANLPEPPEGMEIAHVDVVIRLRAKQG
Sequences:
>Translated_139_residues MTGALPIAIEVRLRGAGLRPTRQRVALGDLLFAKGDRHLTVEELHEEAVAAGVPVSLATVYNTLHQFTEAGLIRVLAVES AKTYFDTNVSDHHHFFVEGENEVLDIPVSNLTIANLPEPPEGMEIAHVDVVIRLRAKQG >Mature_138_residues TGALPIAIEVRLRGAGLRPTRQRVALGDLLFAKGDRHLTVEELHEEAVAAGVPVSLATVYNTLHQFTEAGLIRVLAVESA KTYFDTNVSDHHHFFVEGENEVLDIPVSNLTIANLPEPPEGMEIAHVDVVIRLRAKQG
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15181; Mature: 15049
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGALPIAIEVRLRGAGLRPTRQRVALGDLLFAKGDRHLTVEELHEEAVAAGVPVSLATV CCCCCEEEEEEEEECCCCCCCHHHHHHHHEEEECCCCEEEHHHHHHHHHHCCCCCHHHHH YNTLHQFTEAGLIRVLAVESAKTYFDTNVSDHHHFFVEGENEVLDIPVSNLTIANLPEPP HHHHHHHHHCCEEEEEEECCCCEEEECCCCCCEEEEEECCCCEEEECCCCEEEECCCCCC EGMEIAHVDVVIRLRAKQG CCCEEEEEEEEEEEEECCC >Mature Secondary Structure TGALPIAIEVRLRGAGLRPTRQRVALGDLLFAKGDRHLTVEELHEEAVAAGVPVSLATV CCCCEEEEEEEEECCCCCCCHHHHHHHHEEEECCCCEEEHHHHHHHHHHCCCCCHHHHH YNTLHQFTEAGLIRVLAVESAKTYFDTNVSDHHHFFVEGENEVLDIPVSNLTIANLPEPP HHHHHHHHHCCEEEEEEECCCCEEEECCCCCCEEEEEECCCCEEEECCCCEEEECCCCCC EGMEIAHVDVVIRLRAKQG CCCEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA